LOCUS       AB988972                1178 bp    DNA     linear   VRT 21-MAY-2015
DEFINITION  Rhinogobius nagoyae mitochondrial cytb gene for cytochrome b,
            partial cds, isolate: CB-IR120622-1.
ACCESSION   AB988972
VERSION     AB988972.1
KEYWORDS    .
SOURCE      mitochondrion Rhinogobius nagoyae
  ORGANISM  Rhinogobius nagoyae
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae;
            Gobionellinae; Rhinogobius.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Yamasaki,Y.Y. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2014) to the DDBJ/EMBL/GenBank databases.
            Contact:Yo Y. Yamasaki
            Graduate School of Science, Kyoto University, Department of
            Zoology; Kitashirakawa oiwake, Kyoto, Sakyo, Kyoto 606-8502, Japan
REFERENCE   2  
  AUTHORS   Yamasaki,Y.Y., Nishida,M., Suzuki,T., Mukai,T. and Watanabe,K.
  TITLE     Phylogeny, hybridization, and life history evolution of
            Rhinogobius gobies in Japan, inferred from multiple nuclear gene
            sequences
  JOURNAL   Mol. Phylogenet. Evol. 90, 20-33 (2015)
  REMARK    DOI:10.1016/j.ympev.2015.04.012
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1178
                     /country="Japan: Okinawa, Iriomote Island, Oomijya River"
                     /db_xref="taxon:1544528"
                     /isolate="CB-IR120622-1"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Rhinogobius nagoyae"
                     /specimen_voucher="NSMT:P:120834"
     CDS             <1..1178
                     /codon_start=3
                     /gene="cytb"
                     /product="cytochrome b"
                     /protein_id="BAR80852.1"
                     /transl_table=2
                     /translation="HPLLKIANHALVDLPAPSNISAWWNFGSLLGLCLIAQIVTGLFL
                     AMHYTSDIATAFSSVAHICRDVNFGWLIRNMHANGASFFFICIYLHIGRGLYYGSYLY
                     KETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGGTLVQWIWGG
                     FSVDNATLTRFFAFHFLLPFVVLAATMLHLLFLHETGSNNPAGLNSDADKIPFHPYFS
                     YKDLLGFAIMLLALTCLALFSPNYLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRS
                     IPNKLGGVLALLASILVLMLVPLLHTSKQRSLTFRPLSQFIFWALVADVLILTWIGGM
                     PVEHPYIIIGQVASFLYFFIFLGLFPLTGWLENKLLQVTCISSSAPERRSCKPAAGG"
BASE COUNT          268 a          373 c          198 g          339 t
ORIGIN      
        1 cccatcccct ccttaaaatt gcaaatcacg cactagtaga cctacctgcc ccctcaaaca
       61 tctccgcgtg gtgaaacttt ggctcccttt taggactttg cctaattgcc caaatcgtta
      121 ccggattgtt tcttgcaata cactacacat ctgacatcgc cacggctttc tcatccgtag
      181 cccacatttg ccgagacgta aactttggct gactaatccg aaatatgcat gctaatggtg
      241 cctctttctt ctttatttgc atttacctcc acatcggacg aggactatac tacggctcct
      301 acctatataa agaaacctga aacattggag ttattctcct cctcctagta ataatgacag
      361 ccttcgttgg ctacgtcctg ccctgaggac aaatgtcttt ttgaggtgct accgtcatca
      421 ccaacctcct ttcggcagta ccctatgtgg ggggcactct cgttcaatga atctgaggcg
      481 gcttttcagt cgacaacgct acactgacac gattctttgc attccacttc ctcctcccat
      541 ttgttgttct tgctgctaca atacttcacc tgctcttttt acatgaaacg ggctcaaaca
      601 acccagccgg tttaaactca gatgcagata aaattccttt ccacccatac ttctcctaca
      661 aggaccttct gggctttgca attatactac tcgctctcac ttgcctagca ctgttttccc
      721 cgaactacct cggcgaccca gacaacttca ccccagctaa cccccttgtc acgccccccc
      781 acatcaagcc cgagtgatac ttcttgtttg cctatgccat ccttcgctcc atcccaaata
      841 aactgggagg cgtacttgcg ctccttgcct caattcttgt ccttatactc gtccccctgc
      901 tccacacctc taaacaacga agcctcacat tccgccctct gtcgcaattt atcttctgag
      961 cccttgtagc agatgtacta attctcacct gaattggagg aatgcccgtg gaacacccgt
     1021 acattatcat tggacaggtt gcatctttcc tctacttctt catttttctc ggcctctttc
     1081 ccctaaccgg ctgactagaa aacaaactct tgcaagtaac ctgcattagt agctcagcgc
     1141 cagagcgccg gtcttgtaaa ccggccgccg gaggttaa
//