LOCUS       AB988953                1178 bp    DNA     linear   VRT 21-MAY-2015
DEFINITION  Rhinogobius flumineus mitochondrial cytb gene for cytochrome b,
            partial cds, isolate: RF-KY120402-1.
ACCESSION   AB988953
VERSION     AB988953.1
KEYWORDS    .
SOURCE      mitochondrion Rhinogobius flumineus
  ORGANISM  Rhinogobius flumineus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae;
            Gobionellinae; Rhinogobius.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Yamasaki,Y.Y. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2014) to the DDBJ/EMBL/GenBank databases.
            Contact:Yo Y. Yamasaki
            Graduate School of Science, Kyoto University, Department of
            Zoology; Kitashirakawa oiwake, Kyoto, Sakyo, Kyoto 606-8502, Japan
REFERENCE   2  
  AUTHORS   Yamasaki,Y.Y., Nishida,M., Suzuki,T., Mukai,T. and Watanabe,K.
  TITLE     Phylogeny, hybridization, and life history evolution of
            Rhinogobius gobies in Japan, inferred from multiple nuclear gene
            sequences
  JOURNAL   Mol. Phylogenet. Evol. 90, 20-33 (2015)
  REMARK    DOI:10.1016/j.ympev.2015.04.012
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1178
                     /country="Japan: Kyoto, Kamo River"
                     /db_xref="taxon:293145"
                     /isolate="RF-KY120402-1"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Rhinogobius flumineus"
                     /specimen_voucher="NSMT:P:120821"
     CDS             <1..1178
                     /codon_start=3
                     /gene="cytb"
                     /product="cytochrome b"
                     /protein_id="BAR80833.1"
                     /transl_table=2
                     /translation="HPLIKIANDALVDLPAPSNISAWWNFGSLLGLCLIAQVVTGLFL
                     AMHYTSDIATAFSSVSHICRDVNFGWLIRNMHANGASFFFICIYLHIGRGLYYGSYLY
                     KETWNIGVILLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGGTLVQWIWGG
                     FSVDNATLTRFFAFHFLLPFVVLAATVLHLLFLHETGSNNPAGLNSDADKVPFHPYFS
                     YKDLLGFAMMLLALTSLALFSPNYLGDPDNFIPANPLVTPPHIKPEWYFLFAYAILRS
                     IPNKLGGVLALLASILVLMLVPLLHTSKQRSLTFRPLSQFIFWALVADVLILTWIGGM
                     PVEHPYIIIGQVASFLYFFIFLGLFPLTGWLENKLLQVTCISSSAPERRSCKPAAGG"
BASE COUNT          269 a          364 c          204 g          341 t
ORIGIN      
        1 ctcaccccct cattaaaatt gcaaatgacg cactagtaga cctacctgcc ccttcaaaca
       61 tctccgcgtg atgaaacttt ggctcccttt taggactttg cctaattgcc caagtcgtta
      121 ccgggttgtt tcttgcaata cactacacat ctgacatcgc cacggctttc tcatctgtaa
      181 gccacatctg ccgagacgta aactttggct gactaatccg aaatatgcat gctaatggtg
      241 cctctttttt ctttatttgc atctacctac acatcggacg aggactatac tacggctcct
      301 acctatataa agaaacctga aacattgggg ttatcctcct cctcctggta ataatgacag
      361 cctttgttgg ctatgtcctg ccctggggac aaatgtcttt ctgaggcgct accgtcatca
      421 ccaaccttct ctcagcagta ccctatgtcg ggggcactct cgttcaatga atctgaggcg
      481 gcttttcagt cgacaacgct acgctgacac gattctttgc attccacttc ctcctcccat
      541 ttgttgttct tgctgctaca gtacttcacc tgctcttttt acatgaaaca ggctcaaaca
      601 acccggcagg cttaaactca gatgcagata aagttccttt tcacccctac ttctcctaca
      661 aggaccttct gggctttgca atgatactac tcgctctcac ttccctggca ctgttttccc
      721 cgaactacct cggcgaccca gataacttca tcccagccaa cccccttgtt acacccccgc
      781 acatcaagcc ggagtgatac ttcttatttg cctatgccat ccttcgatcc atcccaaata
      841 aactgggagg cgtacttgca ctccttgcct caattctcgt acttatactc gtccccctac
      901 tccacacttc taaacaacga agcctcacat tccgcccttt atcgcaattt atcttctgag
      961 cccttgtagc agatgtgcta attctcacct gaattggggg aatgcccgtg gaacacccgt
     1021 acattatcat tggacaagtt gcatctttcc tttacttctt catttttctc ggcctcttcc
     1081 ccctaaccgg ctggctagaa aacaaactct tgcaagtaac ctgcattagt agctcagcgc
     1141 cagagcgccg gtcttgtaaa ccggccgccg gaggttaa
//