LOCUS       AB988576                 882 bp    DNA     linear   VRT 21-MAY-2015
DEFINITION  Rhinogobius flumineus RAG2 gene for recombinase-activating
            proteins 2, partial cds, isolate: RF-HI120512-1.
ACCESSION   AB988576
VERSION     AB988576.1
KEYWORDS    .
SOURCE      Rhinogobius flumineus
  ORGANISM  Rhinogobius flumineus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae;
            Gobionellinae; Rhinogobius.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Yamasaki,Y.Y. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2014) to the DDBJ/EMBL/GenBank databases.
            Contact:Yo Y. Yamasaki
            Graduate School of Science, Kyoto University, Department of
            Zoology; Kitashirakawa oiwake, Kyoto, Sakyo, Kyoto 606-8502, Japan
REFERENCE   2  
  AUTHORS   Yamasaki,Y.Y., Nishida,M., Suzuki,T., Mukai,T. and Watanabe,K.
  TITLE     Phylogeny, hybridization, and life history evolution of
            Rhinogobius gobies in Japan, inferred from multiple nuclear gene
            sequences
  JOURNAL   Mol. Phylogenet. Evol. 90, 20-33 (2015)
  REMARK    DOI:10.1016/j.ympev.2015.04.012
COMMENT     
FEATURES             Location/Qualifiers
     source          1..882
                     /country="Japan: Hiroshima, Tabusa River"
                     /db_xref="taxon:293145"
                     /isolate="RF-HI120512-1"
                     /mol_type="genomic DNA"
                     /organism="Rhinogobius flumineus"
     CDS             <1..>882
                     /codon_start=3
                     /gene="RAG2"
                     /product="recombinase-activating proteins 2"
                     /protein_id="BAR80456.1"
                     /transl_table=1
                     /translation="EISSSLYVLTADSRGCNRKLTLKCKEKELVGELPSPRYGHSLNV
                     VQSRGKTAYVIFGGRSYMPGSERTTENWNSVVDCSPQVFLLELEFGCVTAHSIPELHD
                     GQSFHMSVAREDCIYFIGGHSITSDSRPPRLFRLRVELLQGSPLISCQSFDSGTSISS
                     AILTRTGSMHKYIILGGYKFDSQKRMECTEVTLDEKGIHFESLEAPKWTPDISHCRTW
                     FGGSAGEGKVLLAVPIEGRATQSESHCLYTVSFQTQEEAEENGQDGTQGCSQESTDLD
                     DSPPLEDSEELYFGREP"
BASE COUNT          242 a          199 c          215 g          225 t
ORIGIN      
        1 atgagatctc ttccagtttg tacgtcctca ccgccgatag tcgtgggtgc aatcgtaaac
       61 tcacattgaa atgcaaggaa aaagaattgg tgggtgaact tccaagccca agatacggtc
      121 atagtcttaa cgtcgttcaa agtcgaggaa aaacagctta cgtgattttc ggaggcaggt
      181 cgtacatgcc cggatcagaa cgcacaacgg aaaattggaa cagcgttgta gattgttcac
      241 cacaagtctt cttacttgag cttgaatttg gttgtgttac ggctcattcc atccctgaac
      301 tccatgatgg ccaatccttc catatgtcag tcgcaagaga agattgcatc tacttcatag
      361 gcggtcactc tataacttct gattcaagac ctccaagact ttttaggctg cgtgttgaac
      421 tcttrcaagg aagcccgctg atttcttgcc aatcctttga ctctggaacg tccatctcca
      481 gtgcgatcct cacccgtaca ggttcaatgc acaagtacat tatcttagga ggctacaaat
      541 ttgattcgca aaagagaatg gagtgcactg aggtgacttt ggatgaaaag gggatccatt
      601 ttgaatcttt ggaagcaccc aagtggactc cagatattag ccattgccgc acttggtttg
      661 gtggtagcgc tggggagggt aaagttttgc tagctgtacc gatagaagga agggccaccc
      721 aaagcgagtc gcactgccta tatacagtta gtttccaaac gcaagaggaa gcagaggaga
      781 acggacaaga cgggactcaa ggttgtagcc aagagtccac agatttggat gactctcctc
      841 ctcttgaaga ctcagaagag ctgtactttg ggcgtgaacc ac
//