LOCUS       AB988558                 882 bp    DNA     linear   VRT 21-MAY-2015
DEFINITION  Rhinogobius sp. TO RAG2 gene for recombinase-activating proteins
            2, partial cds, isolate: TO-GF120415-7.
ACCESSION   AB988558
VERSION     AB988558.1
KEYWORDS    .
SOURCE      Rhinogobius sp. TO
  ORGANISM  Rhinogobius sp. TO
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae;
            Gobionellinae; Rhinogobius.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Yamasaki,Y.Y. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2014) to the DDBJ/EMBL/GenBank databases.
            Contact:Yo Y. Yamasaki
            Graduate School of Science, Kyoto University, Department of
            Zoology; Kitashirakawa oiwake, Kyoto, Sakyo, Kyoto 606-8502, Japan
REFERENCE   2  
  AUTHORS   Yamasaki,Y.Y., Nishida,M., Suzuki,T., Mukai,T. and Watanabe,K.
  TITLE     Phylogeny, hybridization, and life history evolution of
            Rhinogobius gobies in Japan, inferred from multiple nuclear gene
            sequences
  JOURNAL   Mol. Phylogenet. Evol. 90, 20-33 (2015)
  REMARK    DOI:10.1016/j.ympev.2015.04.012
COMMENT     
FEATURES             Location/Qualifiers
     source          1..882
                     /country="Japan: Gifu, Kandou Pond"
                     /db_xref="taxon:1247120"
                     /isolate="TO-GF120415-7"
                     /mol_type="genomic DNA"
                     /organism="Rhinogobius sp. TO"
                     /specimen_voucher="NSMT:P:120832"
     CDS             <1..>882
                     /codon_start=3
                     /gene="RAG2"
                     /product="recombinase-activating proteins 2"
                     /protein_id="BAR80438.1"
                     /transl_table=1
                     /translation="EISSSLYVLTADSRGCNRKLTLKCKEKELVGELPSPRYGHSLNV
                     VQSRGKTAYVIFGGRSYMPGSERTTENWNSVVDCSPHVFLLELEFGCVTAHSIPELHX
                     GQSFHVSVAREDCIYFIGGHSITSDSRPPRLFRLRVELLQGSPLISCQSFDYGTSISS
                     AILTRTGSMHKYIILGGYKFDSQKRMECTEVTLDEKGIHFESLEAPKWTPDISHCRTW
                     FGGSAGEGNVLLAVPIEGRATQSESHCLYTVSFQTQEEAEENGQDGTQGCSQESTDLD
                     DSPPLEDSEELYFGREP"
BASE COUNT          237 a          199 c          217 g          225 t
ORIGIN      
        1 atgagatctc ttccagtttg tacgtcctca ccgccgatag tcgtgggtgc aatcgtaaac
       61 tcacrttgaa atgcaaggaa aaagaattgg tgggtgaact tccaagccca agatacggtc
      121 atagtcttaa cgtcgttcaa agtcgaggaa aaacagctta cgtgattttc ggaggcaggt
      181 cgtacatgcc cggatcagaa cgcacaacgg aaaattggaa cagcgttgta gattgttcac
      241 cacatgtctt cttacttgag cttgaatttg gttgtgttac ggctcattcc atccctgaac
      301 tccatgamgg ccaatccttc catgtgtcag tcgcaagaga agattgcatc tacttcatwg
      361 gcggtcactc tataacttct gattcaagac ctccaagact ttttaggctg cgtgttgaac
      421 tcttgcaagg aagcccgctg atttcttgcc aatcctttga ctatggaacg tccatctcca
      481 gtgcgatcct cacccgtaca ggttcaatgc acaagtacat tatcttagga ggctacaaat
      541 ttgattcgca aaagagaatg gagtgcactg aggtgacttt ggatgaaaag gggatccatt
      601 ttgaatcttt ggaagcaccc aagtggactc cagatattag ccattgccgc acttggtttg
      661 gtggtagcgc tggggagggt aacgttttgc twgctgtacc gatagaagga agggccaccc
      721 aaagcgagtc gcactgccta tatacagtta gtttccaaac gcaagaggaa gcagaggaga
      781 acggacaaga cgggactcaa ggttgtagcc aagagtccac agatttggat gactctcctc
      841 ctcttgaaga ctcagaagag ctgtactttg ggcgtgaacc ac
//