LOCUS       AB988538                 882 bp    DNA     linear   VRT 16-APR-2019
DEFINITION  Rhinogobius similis RAG2 gene for recombinase-activating proteins
            2, partial cds, isolate: RG-OK110924-19.
ACCESSION   AB988538
VERSION     AB988538.1
KEYWORDS    .
SOURCE      Rhinogobius similis (barecheek goby)
  ORGANISM  Rhinogobius similis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae;
            Gobionellinae; Rhinogobius.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Yamasaki,Y.Y. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2014) to the DDBJ/EMBL/GenBank databases.
            Contact:Yo Y. Yamasaki
            Graduate School of Science, Kyoto University, Department of
            Zoology; Kitashirakawa oiwake, Kyoto, Sakyo, Kyoto 606-8502, Japan
REFERENCE   2  
  AUTHORS   Yamasaki,Y.Y., Nishida,M., Suzuki,T., Mukai,T. and Watanabe,K.
  TITLE     Phylogeny, hybridization, and life history evolution of
            Rhinogobius gobies in Japan, inferred from multiple nuclear gene
            sequences
  JOURNAL   Mol. Phylogenet. Evol. 90, 20-33 (2015)
  REMARK    DOI:10.1016/j.ympev.2015.04.012
COMMENT     
FEATURES             Location/Qualifiers
     source          1..882
                     /country="Japan: Okinawa, Okinawa Island, Aha River"
                     /db_xref="taxon:1263952"
                     /isolate="RG-OK110924-19"
                     /mol_type="genomic DNA"
                     /note="synonym: Rhinogobius giurinus"
                     /organism="Rhinogobius similis"
                     /specimen_voucher="NSMT:P:120818"
     CDS             <1..>882
                     /codon_start=3
                     /gene="RAG2"
                     /product="recombinase-activating proteins 2"
                     /protein_id="BAR80418.1"
                     /transl_table=1
                     /translation="EISSSLYILTADSRGCNRKLTLKCKEKELVGELPSPRYGHSLNV
                     VQSRGKTAYVLFGGRSYMPGSERTTENWNSVVDCSPQVFLFELEFGCVTAHSIPELHD
                     GQSFHVSVAREDCIYFIGGHSITSDSRPPRLFRLRVELLQGSPLISCQSFDSGMSISS
                     AIITRTGSMHKYIILGGYKFDSQKRMECTEVTLDEKGIHFDSLEAPKWTPDISHSRTW
                     FGGSAGEGKVLLAVPIEGRATQSESHCLYTVSFQTQEEAEENGQDGTQGCSQESTDFD
                     DSPPLEDSEELYFGREP"
BASE COUNT          246 a          186 c          213 g          237 t
ORIGIN      
        1 atgagatctc gtcaagtttg tacatcctca ctgccgatag tcgtgggtgc aatcgtaaac
       61 tcacattgaa atgcaaggaa aaagaattgg tgggtgaact tccaagccca agatatggtc
      121 atagtcttaa cgtcgttcaa agtcgaggaa aaacagctta tgttcttttt ggaggcaggt
      181 cgtacatgcc cggatcggaa cgcacaacgg aaaattggaa cagcgttgta gattgttcac
      241 cacaagtctt cttatttgag cttgaatttg gttgtgttac ggctcattcc atcccagaac
      301 tccatgatgg ccaatccttc catgtgtcag tcgcaagaga agattgcatc tacttcatag
      361 ggggtcactc tataacttct gattcaagac ctccaaggct ttttagattg cgtgttgaac
      421 tcttgcaagg aagcccactg atttcctgcc aatcctttga ctctggaatg tccatctcca
      481 gtgcgatcat cacccgtaca ggttcaatgc acaagtacat tatcttagga ggttacaaat
      541 ttgattcgca aaagagaatg gagtgtactg aggtgacttt ggatgaaaag ggaatccatt
      601 ttgactcttt ggaagcaccc aagtggactc cagatattag tcatagccgc acttggtttg
      661 gtggtagcgc tggcgagggt aaggttttgc ttgctgtacc aatagaagga agggctactc
      721 aaagcgagtc acactgccta tacacagtta gtttccaaac acaagaggaa gcagaggaga
      781 atggacaaga cgggactcaa ggttgtagtc aagagtccac agattttgat gactctcctc
      841 cgcttgaaga ttcagaagag ctgtactttg ggcgtgaacc ac
//