LOCUS       AB988531                 882 bp    DNA     linear   VRT 21-MAY-2015
DEFINITION  Rhinogobius nagoyae RAG2 gene for recombinase-activating proteins
            2, partial cds, isolate: CB-SZ110911-6.
ACCESSION   AB988531
VERSION     AB988531.1
KEYWORDS    .
SOURCE      Rhinogobius nagoyae
  ORGANISM  Rhinogobius nagoyae
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae;
            Gobionellinae; Rhinogobius.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   Yamasaki,Y.Y. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2014) to the DDBJ/EMBL/GenBank databases.
            Contact:Yo Y. Yamasaki
            Graduate School of Science, Kyoto University, Department of
            Zoology; Kitashirakawa oiwake, Kyoto, Sakyo, Kyoto 606-8502, Japan
REFERENCE   2  
  AUTHORS   Yamasaki,Y.Y., Nishida,M., Suzuki,T., Mukai,T. and Watanabe,K.
  TITLE     Phylogeny, hybridization, and life history evolution of
            Rhinogobius gobies in Japan, inferred from multiple nuclear gene
            sequences
  JOURNAL   Mol. Phylogenet. Evol. 90, 20-33 (2015)
  REMARK    DOI:10.1016/j.ympev.2015.04.012
COMMENT     
FEATURES             Location/Qualifiers
     source          1..882
                     /country="Japan: Shizuoka, Seto River"
                     /db_xref="taxon:1544528"
                     /isolate="CB-SZ110911-6"
                     /mol_type="genomic DNA"
                     /organism="Rhinogobius nagoyae"
                     /specimen_voucher="NSMT:P:120810"
     CDS             <1..>882
                     /codon_start=3
                     /gene="RAG2"
                     /product="recombinase-activating proteins 2"
                     /protein_id="BAR80411.1"
                     /transl_table=1
                     /translation="EISSSXYVLTXDSRGCNRKLTLKCKEKELVGELPSPRYGHSLNV
                     VQSRGKTAYVIFGGRSYMPGSERTTENWNSVVDCSPQVFLLELEFGCVTAHSIPELHD
                     GQSFHVSVAREDCVYFIGGHSITSDSRPPRLFRLRVELLQGSPLISCQSFDSGTSISS
                     AILTRTGSMHKYIILGGYKFDSQKRMECTEVTLDEKGIHFESLEAPKWTPDVSHCRTW
                     FGGSAGEGKVLLAVPIEGRATQSESHCLYTVSFQTQAEAEENGQDGTQGCSQESTDLD
                     DSPPLEDSEELYFGREP"
BASE COUNT          237 a          202 c          218 g          222 t
ORIGIN      
        1 acgagatctc ttcaagttkg tatgtcctca ccrccgatag tcgtgggtgc aatcgtaaac
       61 tcacattgaa atgcaaggaa aaagaattgg tgggtgaact tccaagccca agatacggtc
      121 atagtcttaa tgtcgttcaa agtcggggaa aaacagctta cgtgattttc ggaggcaggt
      181 cgtacatgcc cgggtcggaa cgcacaactg aaaactggaa cagcgttgta gattgctcac
      241 cacaagtctt cttacttgag cttgaatttg gctgtgttac ggctcattcc atccctgaac
      301 tccatgatgg ccaatccttc catgtgtcag tcgcaagaga agattgcgtc tacttcatag
      361 gcggtcactc tataacttct gattcaagac ctccaagact ttttaggctg cgtgttgaac
      421 tcttgcaagg aagcccgctg atttcttgcc aatcctttga ctctggaacg tccatctcca
      481 gtgcgatcct cacccgtaca ggttcaatgc acaagtacat tatcttagga ggctacaaat
      541 ttgattcgca aaagagaatg gagtgcactg aggtgacttt ggatgaaaag ggaatccatt
      601 ttgaatcttt ggaagcaccc aagtggactc cagatgttag ccattgccgc acttggtttg
      661 gtggtagcgc tggggagggt aaagttttgc tagctgtacc gatagaagga agggccaccc
      721 aaagcgagtc gcactgccta tatacagtta gtttccaaac gcaagcggaa gcagaggaga
      781 acggacaaga cggcactcaa ggttgtagcc aagagtccac agatttggat gactcgcctc
      841 ctcttgaaga ctcagaagag ctktactttg ggcgtgaacc ac
//