LOCUS       AB793964                1141 bp    DNA     linear   VRT 13-FEB-2016
DEFINITION  Pseudogobio esocinus mitochondrial cytb gene for cytochrome b,
            complete cds, isolate: specimen #1440, haplotype: C1_F.
ACCESSION   AB793964
VERSION     AB793964.1
KEYWORDS    .
SOURCE      mitochondrion Pseudogobio esocinus
  ORGANISM  Pseudogobio esocinus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Gobionidae; Gobioninae; Pseudogobio.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Tominaga,K., Nakajima,J. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2013) to the DDBJ/EMBL/GenBank databases.
            Contact:Koji Tominaga
            Kwansei Gakuin Senior High School; Uegahara-ichiban cho,
            Nishinomiya, Hyogo 662-8501, Japan
REFERENCE   2  
  AUTHORS   Tominaga,K., Nakajima,J. and Watanabe,K.
  TITLE     Cryptic divergence and phylogeography of the pike gudgeon
            Pseudogobio esocinus (Teleostei: Cyprinidae): a comprehensive case
            of freshwater phylogeography in Japan
  JOURNAL   Ichthyol Res 63, 79-93 (2016)
  REMARK    DOI:10.1007/s10228-015-0478-3
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1141
                     /collected_by="Koji Tominaga"
                     /collection_date="2008-11-05"
                     /country="Japan:Niigata, Joetsu, Aota R., Seki R. system"
                     /db_xref="taxon:418128"
                     /haplotype="C1_F"
                     /isolate="specimen #1440"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Pseudogobio esocinus"
                     /PCR_primers="fwd_name: L14724, fwd_seq:
                     tgacttgaaraaccaycgyyg, rev_name: H15915, rev_seq:
                     acctccgatctycggattacaagac"
     CDS             1..1141
                     /codon_start=1
                     /gene="cytb"
                     /note="TAA stop codon is completed by the addition of 3'
                     A residues to the mRNA"
                     /product="cytochrome b"
                     /protein_id="BAS02716.1"
                     /transl_except=(pos:1141,aa:TERM)
                     /transl_table=2
                     /translation="MASLRKTHPLMKIANDALVDLPTPSNISVWWNFGSLLGLCLITQ
                     ILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYMHVARGL
                     YYGSYLYKETWNIGVVLLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDTL
                     VQWIWGGFSVDNATLTRFFAFHFLLPFIIAAATLLHLLFLHETGSNNPAGLNSDADKI
                     SFHPYFSYKDLLGFVLMLLALTALALFSPNLLGDPDNFTPANPMVTPPHIKPEWYFLF
                     AYAILRSIPNKLGGVLALLFSILILMVVPILHTSKQRGLTFRPLTQFLFWTLVADMLI
                     LTWIGGMPVEHPYVIIGQIASVLYFALFLVLVPFAGWLENKALKWA"
BASE COUNT          331 a          314 c          178 g          318 t
ORIGIN      
        1 atggcaagcc tacgaaaaac acaccctcta ataaaaatcg ctaatgatgc actagttgac
       61 ctaccaacgc catccaatat ttcagtatga tgaaactttg gatccctcct agggctatgt
      121 ctaattacac aaattttaac gggactattc ctagccatgc actacacctc agacatctca
      181 accgcatttt catcagtagc ccacatttgc cgagatgtaa attacggctg acttattcga
      241 aacctacacg ccaacggggc atcattcttt ttcatttgta tttatataca tgttgcccga
      301 ggcctatact acggatcata cctctacaaa gaaacttgaa acatcggggt tgtactcctc
      361 ctcctaacaa taataacagc cttcgttggc tatgtactcc catgaggaca aatgtcattc
      421 tgaggagcca cagtaattac aaacctatta tcagcagttc catatatagg agatacccta
      481 gttcagtgaa tctgaggggg gttctcagta gataacgcaa cactcacccg attctttgca
      541 ttccatttcc tcctcccatt tattattgcc gccgcaaccc tcctccacct gctattcctg
      601 catgagaccg gatcaaataa cccagccggc ctaaattcag atgcagataa aatctccttc
      661 cacccctatt tttcatacaa agacctcctt ggattcgtac taatactgct ggcacttaca
      721 gcactagcac tattttctcc aaacttacta ggagacccag acaattttac gccagccaac
      781 ccaatggtta ccccaccaca cattaaacca gaatgatact tcctgtttgc ctatgctatc
      841 ctacgatcta tccccaacaa attagggggc gtactggcgt tactattctc tattcttatc
      901 ctaatggtgg taccgatcct gcacacctca aaacaacgag gactaacatt ccgcccactc
      961 actcaattct tattctgaac cctagtggca gacatactaa ttttaacatg aattggaggc
     1021 atacccgtag aacatccata tgttattatt ggccaaattg cgtcggtcct atactttgca
     1081 ctcttcctag tacttgtccc attcgcagga tgactagaaa ataaagcact gaaatgagct
     1141 t
//