LOCUS       AB793888                1141 bp    DNA     linear   VRT 13-FEB-2016
DEFINITION  Pseudogobio esocinus mitochondrial cytb gene for cytochrome b,
            complete cds, isolate: specimen #1212, haplotype: A128_F.
ACCESSION   AB793888
VERSION     AB793888.1
KEYWORDS    .
SOURCE      mitochondrion Pseudogobio esocinus
  ORGANISM  Pseudogobio esocinus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Gobionidae; Gobioninae; Pseudogobio.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Tominaga,K., Nakajima,J. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2013) to the DDBJ/EMBL/GenBank databases.
            Contact:Koji Tominaga
            Kwansei Gakuin Senior High School; Uegahara-ichiban cho,
            Nishinomiya, Hyogo 662-8501, Japan
REFERENCE   2  
  AUTHORS   Tominaga,K., Nakajima,J. and Watanabe,K.
  TITLE     Cryptic divergence and phylogeography of the pike gudgeon
            Pseudogobio esocinus (Teleostei: Cyprinidae): a comprehensive case
            of freshwater phylogeography in Japan
  JOURNAL   Ichthyol Res 63, 79-93 (2016)
  REMARK    DOI:10.1007/s10228-015-0478-3
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1141
                     /collected_by="Koji Tominaga"
                     /collection_date="2008-06-14"
                     /country="Japan:Shimane, Masuda, Yahara R., Misumi R.
                     system"
                     /db_xref="taxon:418128"
                     /haplotype="A128_F"
                     /isolate="specimen #1212"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Pseudogobio esocinus"
                     /PCR_primers="fwd_name: L14724, fwd_seq:
                     tgacttgaaraaccaycgyyg, rev_name: H15915, rev_seq:
                     acctccgatctycggattacaagac"
     CDS             1..1141
                     /codon_start=1
                     /gene="cytb"
                     /note="TAA stop codon is completed by the addition of 3'
                     A residues to the mRNA"
                     /product="cytochrome b"
                     /protein_id="BAS02640.1"
                     /transl_except=(pos:1141,aa:TERM)
                     /transl_table=2
                     /translation="MASLRKTHPLMKIANDALVDLPTPSNISVWWNFGSLLGLCLITQ
                     ILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYMHVARGL
                     YYGSYLYKETWNIGVVLLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDTL
                     VQWIWGGFSVDNATLTRFFAFHFLLPFIIAAATLLHLLFLHETGSNNPAGLNSDADKI
                     SFHPYFSYKDLLGFVLMLLALTSLALFSPNLLGDPDNFTPANPMVTPPHIKPEWYFLF
                     AYAILRSIPNKLGGVLALLFSILILMVVPILHTSKQRGLTFRPLTQFLFWTLVADMLI
                     LTWIGGMPVEHPYVIIGQIASILYFTLFLVLVPLAGWLENKALKWA"
BASE COUNT          327 a          313 c          180 g          321 t
ORIGIN      
        1 atggcaagcc tacgaaaaac acaccctcta ataaaaatcg ctaatgatgc acttgttgac
       61 ctaccaacac cgtccaatat ctcagtatga tgaaactttg gatctcttct aggactatgt
      121 ctgattacac aaattttaac aggactattt ctggccatgc attacacctc ggacatctcg
      181 accgcattct cgtcagtagc ccacatctgc cgggatgtaa attacggctg acttattcgg
      241 aacttacacg ccaatggagc atcattcttt ttcatttgta tttatataca tgttgcccga
      301 ggcctatact acggatccta cctctacaaa gaaacttgaa acattggagt ggtactcctt
      361 ctcctaacaa taataacagc cttcgttggc tacgttcttc catgaggaca aatgtccttc
      421 tgaggagcca cagtaattac aaacctccta tcagcagttc catacatagg ggatacccta
      481 gttcagtgaa tctgaggggg gttctcagta gataacgcaa cactaacccg attctttgca
      541 ttccactttc tcctaccatt cattattgcc gccgcaaccc tcctccacct cctattcctg
      601 cacgaaaccg gatcaaacaa cccggccggc ctaaattcag atgcagacaa aatctccttc
      661 cacccatatt tttcatacaa agaccttctt gggttcgtac tgatactgct agcactgaca
      721 tccttagcac tattttctcc aaacctgctc ggagacccag acaattttac accagctaac
      781 ccaatggtta ccccaccaca tattaaacca gagtgatact tcctgtttgc ctacgccatc
      841 ctgcgatcta ttcctaacaa attaggagga gttcttgcat tgttattctc aattcttatc
      901 ctaatagtgg taccaatcct gcacacttca aaacagcgag gactaacatt ccgcccactc
      961 actcagttct tattctgaac tctagtagca gatatactga ttctaacatg aattggaggc
     1021 atgcccgtag aacacccata tgttattatc ggccaaattg catcaatcct atactttaca
     1081 cttttcctag tgctagtccc actagcagga tgactagaaa acaaagcact aaaatgagct
     1141 t
//