LOCUS       AB793878                1141 bp    DNA     linear   VRT 13-FEB-2016
DEFINITION  Pseudogobio esocinus mitochondrial cytb gene for cytochrome b,
            complete cds, isolate: specimen #1114, haplotype: A118_F.
ACCESSION   AB793878
VERSION     AB793878.1
KEYWORDS    .
SOURCE      mitochondrion Pseudogobio esocinus
  ORGANISM  Pseudogobio esocinus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Gobionidae; Gobioninae; Pseudogobio.
REFERENCE   1  (bases 1 to 1141)
  AUTHORS   Tominaga,K., Nakajima,J. and Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2013) to the DDBJ/EMBL/GenBank databases.
            Contact:Koji Tominaga
            Kwansei Gakuin Senior High School; Uegahara-ichiban cho,
            Nishinomiya, Hyogo 662-8501, Japan
REFERENCE   2  
  AUTHORS   Tominaga,K., Nakajima,J. and Watanabe,K.
  TITLE     Cryptic divergence and phylogeography of the pike gudgeon
            Pseudogobio esocinus (Teleostei: Cyprinidae): a comprehensive case
            of freshwater phylogeography in Japan
  JOURNAL   Ichthyol Res 63, 79-93 (2016)
  REMARK    DOI:10.1007/s10228-015-0478-3
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1141
                     /collected_by="Koji Tominaga"
                     /collection_date="2008-06-13"
                     /country="Japan:Tottori, Tottori, Saji R., Sendai R.
                     system"
                     /db_xref="taxon:418128"
                     /haplotype="A118_F"
                     /isolate="specimen #1114"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Pseudogobio esocinus"
                     /PCR_primers="fwd_name: L14724, fwd_seq:
                     tgacttgaaraaccaycgyyg, rev_name: H15915, rev_seq:
                     acctccgatctycggattacaagac"
     CDS             1..1141
                     /codon_start=1
                     /gene="cytb"
                     /note="TAA stop codon is completed by the addition of 3'
                     A residues to the mRNA"
                     /product="cytochrome b"
                     /protein_id="BAS02630.1"
                     /transl_except=(pos:1141,aa:TERM)
                     /transl_table=2
                     /translation="MASLRKTHPLMKIANDALVDLPTPSNISVWWNFGSLLGLCLITQ
                     ILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYMHVARGL
                     YYGSYLYKETWNIGVVLLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDTL
                     VQWIWGGFSVDNATLTRFFAFHFLLPFIIAAATLLHLLFLHETGSNNPAGLNSDADKI
                     SFHPYFSYKDLLGFVLMLLALTSLALFSPNLLGDPDNFTPANPMVTPPHIKPEWYFLF
                     AYAILRSIPNKLGGVLALLFSILILMVVPVLHTSKQRGLTFRPLTQFLFWTLVADMLI
                     LTWIGGMPVEHPYVIIGQIASILYFALFLVLVPLAGWLENKALKWA"
BASE COUNT          325 a          309 c          183 g          324 t
ORIGIN      
        1 atggcaagcc tacgaaaaac acaccctcta ataaaaatcg ctaatgatgc acttgttgac
       61 ctaccaacac cgtccaatat ctcagtatga tgaaactttg ggtctcttct aggactatgt
      121 ctgattacac agattttaac aggactattt ctagccatgc attacacctc agacatctca
      181 accgcattct cgtcagtagc ccacatctgc cgagatgtaa attacggctg acttattcgg
      241 aacttacacg ccaatggagc atcattcttt ttcatttgta tttatataca tgttgcccga
      301 ggcctatact acggatccta cctctacaaa gaaacttgaa acattggagt agtactcctt
      361 ctcctaacaa taataacagc cttcgttggc tacgttcttc catgaggaca aatgtccttc
      421 tgaggggcca cagtaattac gaacctctta tcggcagttc catacatagg agatacccta
      481 gttcagtgaa tctgaggggg gttctcagta gataacgcaa cactgacccg attctttgca
      541 ttccactttc tcctaccatt tattattgcc gccgcaaccc tcctccacct cctattcctg
      601 cacgaaactg gatcaaataa cccggccggc ctaaattcag atgcagacaa aatctccttc
      661 cacccatatt tttcatacaa agaccttctt ggattcgtac tgatactgct ggcactgaca
      721 tcattagcac tattttctcc aaacctgctc ggagacccag acaattttac accagccaac
      781 ccaatggtta ccccaccaca tattaaaccg gagtgatact tcctgtttgc ctacgccatc
      841 ctgcgatcta ttcctaacaa attaggagga gttcttgcat tgttattctc aattcttatc
      901 ctaatagtgg taccagtcct gcacacttca aaacaacgag gactaacatt ccgcccactc
      961 actcagttct tattctgaac cctagtagca gatatactga ttctgacatg aattggaggc
     1021 atacccgtag aacacccata tgttattatt ggccaaattg catcaatcct atactttgca
     1081 cttttcctag tgctagtccc actagcagga tgactagaga acaaagcact aaaatgagct
     1141 t
//