LOCUS AB780995 620 bp DNA linear VRT 04-OCT-2013 DEFINITION Sarcocheilichthys variegatus variegatus mitochondrial genes for cytochrome b, tRNA-Thr, partial cds and partial sequence, haplotype: E002. ACCESSION AB780995 VERSION AB780995.1 KEYWORDS . SOURCE mitochondrion Sarcocheilichthys variegatus variegatus ORGANISM Sarcocheilichthys variegatus variegatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Sarcocheilichthyinae; Sarcocheilichthys. REFERENCE 1 (bases 1 to 620) AUTHORS Watanabe,K. and Komiya,T. TITLE Direct Submission JOURNAL Submitted (31-JAN-2013) to the DDBJ/EMBL/GenBank databases. Contact:Katsutoshi Watanabe Graduate School of Science, Kyoto University, Department of Zoology, Division of Biological Science; Kitashirakawa-oiwakecho, Sakyo, Kyoto, Kyoto 606-8502, Japan REFERENCE 2 AUTHORS Komiya,T., Fujita-Yanagibayashi,S. and Watanabe,K. TITLE Multiple colonization of Lake Biwa by Sarcocheilichthys fishes and their population history JOURNAL Unpublished (2013) COMMENT FEATURES Location/Qualifiers source 1..620 /country="Japan:Mie, Kuwana, Hijie River" /db_xref="taxon:481702" /haplotype="E002" /identified_by="Takefumi Komiya" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Sarcocheilichthys variegatus variegatus" /sub_species="variegatus" CDS <1..592 /codon_start=1 /gene="cytb" /note="TAA stop codon is completed by the addition of 3'A residues to the mRNA" /product="cytochrome b" /protein_id="BAN92422.1" /transl_except=(pos:592,aa:TERM) /transl_table=2 /translation="LLPFIIAAATIIHLLFLHETGSNNPAGLNSDADKISFHPYFSYK DLLGFVLMLLALTSLALFSPNLLGDPDNFTPANPMVTPPHIKPEWYFLFAYAILRSIP NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPVTQFLFWTLVADMVILTWIGGMPV EHPYVIIGQIASVLYFALFLVLIPLAGWLENKALKWA" tRNA 593..>620 /product="tRNA-Thr" BASE COUNT 170 a 183 c 95 g 172 t ORIGIN 1 ctacttccat ttattattgc cgccgccacc attatccacc tgctgtttct acacgaaacg 61 ggctcaaaca acccggccgg gctgaactcc gacgcagata aaatttcttt ccacccgtac 121 ttctcataca aagaccttct aggcttcgta ttaatattat tagccctcac atcattagcc 181 ctattctccc ccaacctgtt aggagaccca gacaacttta cccccgccaa cccaatagta 241 acacccccac atattaagcc tgaatgatac ttcttatttg cctacgccat cctacgatca 301 attccaaaca aattaggagg ggtccttgca ttactattct ccattctagt actaatagtg 361 gtcccgattc tccatacctc aaaacaacgg ggcctcacat tccgcccagt aactcagttt 421 ttattctgaa ccctggtggc ggatatagtt atcctaacat gaattggagg tatacccgta 481 gagcacccat acgttattat cggacaaatc gcatctgtcc tgtacttcgc acttttcctc 541 gtccttattc cactagcagg atgactagaa aataaagcac taaaatgagc ttgccctagt 601 agcttagtct aaaagcatcg //