LOCUS AB780992 620 bp DNA linear VRT 04-OCT-2013 DEFINITION Sarcocheilichthys variegatus variegatus mitochondrial genes for cytochrome b, tRNA-Thr, partial cds and partial sequence, haplotype: D002. ACCESSION AB780992 VERSION AB780992.1 KEYWORDS . SOURCE mitochondrion Sarcocheilichthys variegatus variegatus ORGANISM Sarcocheilichthys variegatus variegatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Sarcocheilichthyinae; Sarcocheilichthys. REFERENCE 1 (bases 1 to 620) AUTHORS Watanabe,K. and Komiya,T. TITLE Direct Submission JOURNAL Submitted (31-JAN-2013) to the DDBJ/EMBL/GenBank databases. Contact:Katsutoshi Watanabe Graduate School of Science, Kyoto University, Department of Zoology, Division of Biological Science; Kitashirakawa-oiwakecho, Sakyo, Kyoto, Kyoto 606-8502, Japan REFERENCE 2 AUTHORS Komiya,T., Fujita-Yanagibayashi,S. and Watanabe,K. TITLE Multiple colonization of Lake Biwa by Sarcocheilichthys fishes and their population history JOURNAL Unpublished (2013) COMMENT FEATURES Location/Qualifiers source 1..620 /country="Japan:Kyoto, Ayabe, Yura River" /db_xref="taxon:481702" /haplotype="D002" /identified_by="Takefumi Komiya" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Sarcocheilichthys variegatus variegatus" /sub_species="variegatus" CDS <1..592 /codon_start=1 /gene="cytb" /note="TAA stop codon is completed by the addition of 3'A residues to the mRNA" /product="cytochrome b" /protein_id="BAN92419.1" /transl_except=(pos:592,aa:TERM) /transl_table=2 /translation="LLPFIIAAATIIHLLFLHETGSNNPAGLNSDADKISFHPYFSYK DLLGFVLMLLALTSLALFSPNLLGDPDNFTPANPMVTPPHIKPEWYFLFAYAILRSIP NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPVTQFLFWALVADMIILTWIGGMPV EHPYVIIGQIASVLYFALFLVLIPLAGWLENKALKWA" tRNA 593..>620 /product="tRNA-Thr" BASE COUNT 171 a 182 c 93 g 174 t ORIGIN 1 ctacttccat ttattattgc cgccgccacc attatccacc tgctgtttct acacgaaacg 61 ggctcaaaca acccagccgg gctaaactcc gacgcagata aaatttcttt ccacccgtac 121 ttctcatata aagaccttct cggctttgta ttaatattat tagccctcac atcattagcc 181 ctattctccc ccaacctgtt aggagaccca gacaacttta cccccgccaa cccaatagtg 241 acacccccac atattaagcc tgaatgatac ttcttatttg cctacgccat cctacgatca 301 attccaaaca aactaggggg agtccttgca ttactattct ccattctagt actaatagtg 361 gtcccaattc tccatacctc aaaacaacgg ggcctcacat tccgcccggt aactcagttt 421 ttattctgag ccctggtggc agatataatt atcctaacat gaattggggg tatacccgta 481 gaacacccat acgttattat tggacaaatc gcatctgtcc tatacttcgc acttttcctc 541 gtccttattc cactagcagg gtgactagaa aataaagcac taaaatgagc ttgccctagt 601 agcttagtct aaaagcatcg //