LOCUS AB780988 620 bp DNA linear VRT 04-OCT-2013 DEFINITION Sarcocheilichthys variegatus variegatus mitochondrial genes for cytochrome b, tRNA-Thr, partial cds and partial sequence, haplotype: B008. ACCESSION AB780988 VERSION AB780988.1 KEYWORDS . SOURCE mitochondrion Sarcocheilichthys variegatus variegatus ORGANISM Sarcocheilichthys variegatus variegatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Sarcocheilichthyinae; Sarcocheilichthys. REFERENCE 1 (bases 1 to 620) AUTHORS Watanabe,K. and Komiya,T. TITLE Direct Submission JOURNAL Submitted (31-JAN-2013) to the DDBJ/EMBL/GenBank databases. Contact:Katsutoshi Watanabe Graduate School of Science, Kyoto University, Department of Zoology, Division of Biological Science; Kitashirakawa-oiwakecho, Sakyo, Kyoto, Kyoto 606-8502, Japan REFERENCE 2 AUTHORS Komiya,T., Fujita-Yanagibayashi,S. and Watanabe,K. TITLE Multiple colonization of Lake Biwa by Sarcocheilichthys fishes and their population history JOURNAL Unpublished (2013) COMMENT FEATURES Location/Qualifiers source 1..620 /country="Japan:Hyogo, Sasayama, Muko River" /db_xref="taxon:481702" /haplotype="B008" /identified_by="Takefumi Komiya" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Sarcocheilichthys variegatus variegatus" /sub_species="variegatus" CDS <1..592 /codon_start=1 /gene="cytb" /note="TAA stop codon is completed by the addition of 3'A residues to the mRNA" /product="cytochrome b" /protein_id="BAN92415.1" /transl_except=(pos:592,aa:TERM) /transl_table=2 /translation="LLPFIIAAATITHLLFLHETGSNNPAGLNSDADKISFHPYFSYK DLLGFVLMLLALTSLALFSPNLLGDPDNFTPANPMVTPPHIKPEWYFLFAYAILRSIP NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPVTQFLFWALVADMIILTWIGGMPV EHPYVIIGQIASVLYFSLFLVLIPLAGWLENKALKWA" tRNA 593..>620 /product="tRNA-Thr" BASE COUNT 172 a 181 c 91 g 176 t ORIGIN 1 ctacttccat ttattattgc cgccgccacc attacccacc tgctgttttt acacgaaacg 61 ggctcaaaca acccagccgg gctgaactcc gacgcagata aaatttcttt ccacccgtac 121 ttctcatata aagaccttct cggctttgta ttaatattat tagccctcac atcattagcc 181 ctattctccc ccaacctgtt aggagaccca gacaacttta cccccgccaa cccaatagtg 241 acacccccgc atattaagcc tgaatgatac ttcttatttg cctacgccat cctacgatca 301 attccaaaca aattaggggg agtccttgca ttactattct ccattctagt actaatagtg 361 gtcccaattc tccatacctc aaaacaacgg ggcctcacat tccgcccagt aactcagttt 421 ttattctgag ccctggtggc agatataatt atcctaacat gaattggagg tatacccgta 481 gaacacccat acgttattat tggacaaatc gcatctgtcc tatacttctc acttttcctc 541 gtccttattc cactagcagg atgactagaa aataaagcac taaaatgagc ttgccctagt 601 agcttagtct aaaagcatcg //