LOCUS AB601470 620 bp DNA linear VRT 08-JUL-2011 DEFINITION Sarcocheilichthys variegatus microoculus mitochondrial genes for cytochrome b, tRNA-Thr, partial cds and partial sequence, haplotype: C004. ACCESSION AB601470 VERSION AB601470.1 KEYWORDS . SOURCE mitochondrion Sarcocheilichthys variegatus microoculus ORGANISM Sarcocheilichthys variegatus microoculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Sarcocheilichthyinae; Sarcocheilichthys. REFERENCE 1 (bases 1 to 620) AUTHORS Komiya,T. and Watanabe,K. TITLE Direct Submission JOURNAL Submitted (18-NOV-2010) to the DDBJ/EMBL/GenBank databases. Contact:Takefumi Komiya Kyoto University, Laboratory of Animal Ecology, Department of Zoology, Graduate School of Science; Kitashirakawa-Oiwakecho, Sakyo, Kyoto, Kyoto 6068502, Japan REFERENCE 2 AUTHORS Komiya,T., Fujita,S. and Watanabe,K. TITLE A Novel Resource Polymorphism in Fish, Driven by Differential Bottom Environments: An Example from an Ancient Lake in Japan JOURNAL PLoS ONE 6, e17430 (2011) REMARK Publication Status: Online-Only COMMENT FEATURES Location/Qualifiers source 1..620 /collected_by="Takefumi Komiya" /collection_date="2006" /country="Japan:Shiga, Hikone, Takeshima, Lake Biwa" /db_xref="taxon:149978" /haplotype="C004" /identified_by="Takefumi Komiya" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Sarcocheilichthys variegatus microoculus" /PCR_primers="fwd_name: L14724, fwd_seq: tgacttgaaraaccaycgyy, rev_name: H15915, rev_seq: acctccgatctycggattacaagac" CDS <1..592 /codon_start=1 /gene="cytb" /note="TAA stop codon is completed by the addition of 3'A residues to the mRNA" /product="cytochrome b" /protein_id="BAK24063.1" /transl_except=(pos:592,aa:TERM) /transl_table=2 /translation="LLPFIIAAATIIHLLFLHETGSNNPAGLNSDADKISFHPYFSYK DLLGFVLMLLALTSLALFSPNLLGDPDNFTPANPMVTPPHIKPEWYFLFAYAILRSIP NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPVTQFLFWALVADMIILTWIGGMPV EHPYVIIGQIASVLYFALFLVLIPLAGWLENKALKWA" tRNA 593..>620 /product="tRNA-Thr" BASE COUNT 171 a 180 c 93 g 176 t ORIGIN 1 ctacttccat ttattattgc cgccgccacc attatccatc tgctgttttt acacgaaacg 61 ggctcaaaca acccagccgg gctgaactcc gacgcagata aaatttcttt ccacccgtac 121 ttctcatata aagaccttct cggctttgta ttaatattat tagccctcac atcactagcc 181 ctattctccc ccaacctgtt aggagaccca gacaacttta cccccgccaa cccaatggtg 241 acacccccac atattaagcc tgaatgatac ttcttatttg cctacgccat cctacgatca 301 attccaaaca aattaggggg agtccttgca ttactattct ccattctagt actaatagtg 361 gtcccgattc tccatacctc aaaacaacgg ggcctcacat tccgcccagt aactcagttt 421 ttattctgag ccctggtggc agatataatc atcttaacat gaattggagg tatacccgta 481 gaacacccat acgttattat tggacaaatc gcatctgtcc tatacttcgc acttttcctc 541 gtccttattc cactagcagg atgactagaa aataaagcac taaaatgagc ttgccctagt 601 agcttagtct aaaagcatcg //