LOCUS AB601464 620 bp DNA linear VRT 08-JUL-2011 DEFINITION Sarcocheilichthys variegatus microoculus mitochondrial genes for cytochrome b, tRNA-Thr, partial cds and partial sequence, haplotype: A021. ACCESSION AB601464 VERSION AB601464.1 KEYWORDS . SOURCE mitochondrion Sarcocheilichthys variegatus microoculus ORGANISM Sarcocheilichthys variegatus microoculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Sarcocheilichthyinae; Sarcocheilichthys. REFERENCE 1 (bases 1 to 620) AUTHORS Komiya,T. and Watanabe,K. TITLE Direct Submission JOURNAL Submitted (18-NOV-2010) to the DDBJ/EMBL/GenBank databases. Contact:Takefumi Komiya Kyoto University, Laboratory of Animal Ecology, Department of Zoology, Graduate School of Science; Kitashirakawa-Oiwakecho, Sakyo, Kyoto, Kyoto 6068502, Japan REFERENCE 2 AUTHORS Komiya,T., Fujita,S. and Watanabe,K. TITLE A Novel Resource Polymorphism in Fish, Driven by Differential Bottom Environments: An Example from an Ancient Lake in Japan JOURNAL PLoS ONE 6, e17430 (2011) REMARK Publication Status: Online-Only COMMENT FEATURES Location/Qualifiers source 1..620 /collected_by="Takefumi Komiya" /collection_date="2006" /country="Japan:Shiga, Takashima, Adogawa, Kitafunaki, Lake Biwa" /db_xref="taxon:149978" /haplotype="A021" /identified_by="Takefumi Komiya" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Sarcocheilichthys variegatus microoculus" /PCR_primers="fwd_name: L14724, fwd_seq: tgacttgaaraaccaycgyy, rev_name: H15915, rev_seq: acctccgatctycggattacaagac" CDS <1..592 /codon_start=1 /gene="cytb" /note="TAA stop codon is completed by the addition of 3'A residues to the mRNA" /product="cytochrome b" /protein_id="BAK24057.1" /transl_except=(pos:592,aa:TERM) /transl_table=2 /translation="LLPFIIAAATIIHLLFLHETGSNNPAGLNSDADKISFHPYFSYK DLLGFVLMLLALTSLALFSPNLLGDPDNFTPANPMVTPPHIKPEWYFLFAYAILRSIP NKLGGVLALLSSILVLMVVPILHTSKQRGLTFRPVTQFLFWALVADMIILTWIGGMPV EHPYVIIGQIASVLYFALFLVLIPLAGWLENKALKWA" tRNA 593..>620 /product="tRNA-Thr" BASE COUNT 173 a 183 c 91 g 173 t ORIGIN 1 ctacttccat ttattattgc cgccgccacc attatccacc tgctgtttct acacgaaacg 61 ggctcaaaca acccagccgg gctgaactcc gacgcagata aaatttcttt ccacccgtac 121 ttctcatata aagaccttct cggctttgta ttaatattat tagccctcac atcattagcc 181 ctattctccc ccaacctgtt aggagaccca gacaacttta cccccgccaa cccaatagtg 241 acacccccac atattaagcc tgaatgatac ttcttatttg cctacgccat cctacgatca 301 attccaaaca aattaggggg agtccttgca ttactatcct ccattctagt actaatagtg 361 gtcccaattc tccatacctc aaaacaacga ggcctcacat tccgcccagt aactcagttt 421 ttattctgag ccctggtggc agatataatt atcctaacat gaattggggg catacccgta 481 gaacacccat acgttattat tggacaaatc gcatctgtcc tatacttcgc acttttcctc 541 gtccttattc cactagcagg atgactagaa aataaagcac taaaatgagc ttgccctagt 601 agcttagtct aaaagcatcg //