LOCUS       AB573091                 557 bp    DNA     linear   VRT 29-NOV-2011
DEFINITION  Oncorhynchus nerka mitochondrial cytb gene for cytochrome b,
            partial cds, haplotype: Hap-3.
ACCESSION   AB573091
VERSION     AB573091.1
KEYWORDS    .
SOURCE      mitochondrion Oncorhynchus nerka (sockeye salmon)
  ORGANISM  Oncorhynchus nerka
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Yamamoto,S. and Kitamura,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2010) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoichiro Yamamoto
            National Research Institute of Fisheries Science, Freshwater
            Fisheries Research Division; Chugushi 2482-3, Nikko 321-1661, Japan
REFERENCE   2  
  AUTHORS   Yamamoto,S., Kitamura,S., Sakano,H. and Morita,K.
  TITLE     Genetic structure and diversity of Japanese kokanee Oncorhynchus
            nerka stocks as revealed by microsatellite and mitochondrial DNA
            markers
  JOURNAL   J. Fish Biol. 79, 1340-1349 (2011)
  REMARK    DOI:10.1111/j.1095-8649.2011.03098.x
COMMENT     
FEATURES             Location/Qualifiers
     source          1..557
                     /country="Japan:Lake Motosu"
                     /db_xref="taxon:8023"
                     /haplotype="Hap-3"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Oncorhynchus nerka"
     CDS             <1..>557
                     /codon_start=2
                     /gene="cytb"
                     /product="cytochrome b"
                     /protein_id="BAL04573.1"
                     /transl_table=2
                     /translation="LLFLHETGSNNPAGINSDADKISFHPYFSYKDLLGFVAMLLGLT
                     SLALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSI
                     LVLMVVPILHTSKQRGLTFRPLTQFLFWALVADMLILTWIGGMPVEHPFIIIGQVASV
                     IYFTIFLVLSPLAGWAENKALQWAC"
BASE COUNT          125 a          181 c           97 g          154 t
ORIGIN      
        1 cctgctgttc cttcacgaaa cagggtctaa taacccagca gggattaact ccgatgccga
       61 taaaatctcg ttccaccctt acttctcata caaagacctc ctggggttcg tagccatact
      121 tcttggtcta acatccttag ccctttttgc accaaacctc ctgggagatc cagacaattt
      181 tacgcccgcc aacccgctgg ttaccccacc tcatatcaaa ccagagtgat acttcctttt
      241 cgcttacgcc atcttacgct ccatccccaa caagctaggc ggagtgctcg cccttttgtt
      301 ctcgatcctc gtccttatgg ttgtccctat cttacacacg tctaaacaac gagggctaac
      361 ctttcgacca ctaacccaat tcttattttg ggccttagtg gcggatatac tcatcctcac
      421 ctgaatcggg ggcatacccg tagaacatcc gttcattatt atcggccaag ttgcctccgt
      481 aatctacttc accatcttcc tagtgctttc tcccttggcc ggctgggccg aaaataaagc
      541 cctccaatga gcctgcc
//