LOCUS       AB510486                1991 bp    DNA     linear   PLN 13-AUG-2009
DEFINITION  Oryza glumipatula Snorkel 2 gene for Ethylene response factor,
            complete cds, cultivar: IRGC105668.
ACCESSION   AB510486
VERSION     AB510486.1
KEYWORDS    .
SOURCE      Oryza glumipatula
  ORGANISM  Oryza glumipatula
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ashikari,M. and Hattori,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2009) to the DDBJ/EMBL/GenBank databases.
            Contact:Motoyuki Ashikari
            Nagoya university, Bioscience and Biotechnology Center; Furo-cho,
            Chikusa-ku, Nagoya, Aichi 464-8601, Japan
REFERENCE   2  
  AUTHORS   Hattori,Y., Nagai,K., Furukawa,S., Song,X., Kawano,R.,
            Sakakibara,H., Wu,J., Matsumoto,T., Yoshimura,A., Kitano,H.,
            Matsuoka,M., Mori,H. and Ashikari,M.
  TITLE     The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to
            adapt to deepwater
  JOURNAL   Nature (2009) In press
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1991
                     /chromosome="12"
                     /cultivar="IRGC105668"
                     /db_xref="taxon:40148"
                     /mol_type="genomic DNA"
                     /note="synonym: Oryza glumaepatula"
                     /organism="Oryza glumipatula"
     CDS             join(1..193,1417..1991)
                     /codon_start=1
                     /gene="Snorkel 2"
                     /gene_synonym="SK2"
                     /product="ethylene response factor"
                     /protein_id="BAH96572.1"
                     /transl_table=1
                     /translation="MCGENDDNGGAAGSSRRLPAVGAMRGPCGCEEKLKTTVVVVLSD
                     DDDYEEEFRRYCENTTLPAKGRPTARKKQHRHRFHGIHRRKSGRWSAEIRDNVIMGSR
                     SWVGTFDTAEEAAWAYDAVARRLYGAKARTNFHHLPPPRPVVPLPAPAVAKRKMNSKR
                     KKPAEVAVAAEMVAPAGGEPAAGEMAPVLLGNALEATNGWEFEPYSCMGLVVGGAVQL
                     LHNYAADEPEPADELQLLHLHGGAMVDFAADGCLWSF"
BASE COUNT          508 a          446 c          509 g          528 t
ORIGIN      
        1 atgtgcggag aaaacgatga caatggcggc gccgccggca gcagccgccg gctgccggcg
       61 gtgggggcaa tgcgaggccc ctgcggctgc gaggagaagc ttaagacgac ggtggtggtg
      121 gtgttgtcgg acgacgacga ctacgaggag gagttcagga ggtactgcga aaacaccaca
      181 ctcccggcca aaggttaata atctcggcac tatatatata tatatatata gttattttca
      241 tgcgtgctca tcgttttccg tctttataat ttcatgagta ttttcatttc ctttttccat
      301 atctctagct agctagtcta aagtatggta gttaagtagt tgtttatatt atatagggca
      361 tgtttgagga agcttttgat tctgagaaac agctgtttgt tagtcagctt ctgagaatct
      421 ggaaaagcta tgaaacccag cttctccagc ttctggcttc ttagttcatt tttcagaatc
      481 tgtaactgtt tgggacagct tctagcagaa gcagtttttg agaaaagctg tagctgggac
      541 aagctccccc aaacaaggcc atagattgag tagacaccgc tctcttgtct cactgtacgt
      601 caaaataaat tcggatataa aagctgattt atttcgatga agatagagta atatattatg
      661 tatggctgct ccagctctaa ttactagcta ctccctccgt ttcacaatgt aaaactttct
      721 agcattgccc acatacatat agatgttaat gaatctaaac gcatacatat gtcttgattc
      781 attaacacgt aaatgaatgt ggacaatgct agaaagtctt acattatgaa atggaggaag
      841 tactactttg atgagtattt tcatgagcat gtcaatcaac aaatatgatg gaggaagtgg
      901 agtataggag tattctttag cacttgtcct gcttactact aataatatta tattgctagt
      961 tctcccaaca tattggaagg acactggtcc ttgctcgatc agctgtgtac cttcttttga
     1021 gggcgttggt caacttttgt acagacaagg gagagaaaaa tacacaccct aaagacttac
     1081 tgctgattat ataattacta aaccataaga tcaacatcac ggtctttgct cttaccgatt
     1141 tggcctttct gtatgtacca tatatagact ctttcttatt ctttattata acactacttc
     1201 tagcagttgg tttttcctag gacaaattaa agggctctcc attatatatc ttttaaaaag
     1261 aaaagagcac aaatgcaata gaaagaggcc gggcaggggg aaatgatttt ttttttccaa
     1321 atcatttttg ttttggtatt tttttttcag attcacatat atactcgaaa acgtgcatat
     1381 caatatttaa tccggcgggt gtttgcagct gacaagggcg gccgacggcg agaaagaagc
     1441 agcaccggca ccgcttccac ggcatccacc ggcgcaagag cgggcggtgg tcggccgaaa
     1501 ttagagacaa cgtcatcatg ggctcccgct cgtgggttgg aaccttcgat acggcggagg
     1561 aggcggcgtg ggcgtacgac gccgtcgcgc ggcggctcta cggcgccaaa gcccggacca
     1621 acttccacca tctgccgccg ccgcggccgg tggttccact tccagctccc gccgtggcca
     1681 agaggaagat gaacagtaag aggaagaagc cggcagaggt ggcggtggcg gccgagatgg
     1741 tagcccccgc cggcggcgag ccggcagccg gggagatggc gccggtgctg ctgggtaatg
     1801 cattggaggc aacgaatggg tgggagttcg agccctacag ctgcatgggg ctagtcgtag
     1861 gcggcgccgt gcagctgctg cacaactacg ccgccgacga gccggagccg gcggatgagc
     1921 ttcagctgct gcatctgcac ggcggcgcca tggtcgactt cgccgccgac ggctgcctct
     1981 ggtcctttta g
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