LOCUS       AB497597                 557 bp    DNA     linear   VRT 22-NOV-2011
DEFINITION  Salvelinus leucomaenis japonicus mitochondrial cytb gene for
            cytochrome b, partial cds, haplotype: Hap-38.
ACCESSION   AB497597
VERSION     AB497597.2
KEYWORDS    .
SOURCE      mitochondrion Salvelinus leucomaenis japonicus
  ORGANISM  Salvelinus leucomaenis japonicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Salvelinus.
REFERENCE   1  (bases 1 to 557)
  AUTHORS   Watanabe,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2009) to the DDBJ/EMBL/GenBank databases.
            Contact:Katsutoshi Watanabe
            Graduate School of Science, Kyoto University, Department of
            Zoology, Division of Biological Science, Graduate School of
            Science; Kitashirakawa-Oiwakecho, Kyoto, Sakyo, Kyoto 606-8502,
            Japan
REFERENCE   2  
  AUTHORS   Sato,T., Demise,T., Kubota,H., Nagoshi,M. and Watanabe,K.
  TITLE     Hybridization, Isolation, and Low Genetic Diversity of Kirikuchi
            Char, the Southernmost Populations of the Genus Salvelinus
  JOURNAL   Trans. Am. Fish. Soc. 139, 1758-1774 (2010)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..557
                     /collected_by="Takuya Sato"
                     /collection_date="2001-10"
                     /country="Japan:Nara, Nosegawa, Yumitehara River"
                     /db_xref="taxon:287195"
                     /haplotype="Hap-38"
                     /identified_by="Takuya Sato"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Salvelinus leucomaenis japonicus"
                     /sub_species="japonicus"
     CDS             <1..>557
                     /codon_start=2
                     /gene="cytb"
                     /product="cytochrome b"
                     /protein_id="BAJ22807.2"
                     /transl_table=2
                     /translation="LLFLHETGSNNPAGINSDADKISFHPYFSYKDLLGFVAMLLGLT
                     ALALFAPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSI
                     LVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADMLILTWIGGMPVEHPFIIIGQVASV
                     IYFTIFLVLAPLAGWAENKALEWAC"
BASE COUNT          136 a          185 c           87 g          149 t
ORIGIN      
        1 ccttctgttt ctacatgaga ccgggtccaa taacccagca gggatcaact cagacgccga
       61 taaaatctca ttccacccct acttctcgta caaagatctc ctcggtttcg tagccatatt
      121 acttggccta acagccctgg ctcttttcgc acctaacctc ctgggagacc cagacaattt
      181 cacgccagcc aaccccctag tcaccccacc ccacatcaag cccgaatggt acttcttatt
      241 cgcctacgca attttacgat ctattcccaa taaactagga ggagtactcg cccttttatt
      301 ctcaatcctt gtcctcatag ttgtcccaat cctacacacc tctaaacagc gcggactaac
      361 ctttcgacca ctaactcaat tcttattctg aaccctagta gcggatatac tcatcctcac
      421 ctgaattgga ggcatgcccg ttgaacaccc atttattatt atcggccaag ttgcctctgt
      481 gatttacttc accatcttcc tagtcctcgc ccccttagcc ggttgggccg aaaataaagc
      541 cctcgaatga gcctgcc
//