LOCUS AB426339 689 bp DNA linear VRT 19-AUG-2010 DEFINITION Pseudogobio esocinus mitochondrial cytb gene for cytochrome b, partial cds, haplotype: Ky01. ACCESSION AB426339 VERSION AB426339.1 KEYWORDS . SOURCE mitochondrion Pseudogobio esocinus ORGANISM Pseudogobio esocinus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Gobioninae; Pseudogobio. REFERENCE 1 (bases 1 to 689) AUTHORS Tominaga,K., Watanabe,K., Kakioka,R., Mori,S. and Jeon,S.R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2008) to the DDBJ/EMBL/GenBank databases. Contact:Koji Tominaga Kyoto University, Graduate School of Science; Kitashirakawa-Oiwakecho, Kyoto, Kyoto 606-8502, Japan REFERENCE 2 AUTHORS Tominaga,K., Watanabe,K., Kakioka,R., Mori,S. and Jeon,S.-R. TITLE Two highly divergent mitochondrial DNA lineages within Pseudogobio esocinus populations in central Honshu, Japan JOURNAL Ichthyol Res 56, 195-199 (2009) COMMENT FEATURES Location/Qualifiers source 1..689 /collected_by="Koji Tominaga and Jun Nakajima" /collection_date="2007-06-04" /country="Japan:Kumamoto, Tamana, Kikuchi R." /db_xref="taxon:418128" /haplotype="Ky01" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Pseudogobio esocinus" /PCR_primers="fwd_name: L14724, fwd_seq: TGACTTGAARAACCAYCGYYG, rev_name: H15915, rev_seq: ACCTCCGATCTYCGGATTACAAGAC" CDS <1..689 /codon_start=2 /gene="cytb" /note="TAA stop codon is completed by the addition of 3' A residues to the mRNA" /product="cytochrome b" /protein_id="BAG71878.1" /transl_except=(pos:689,aa:TERM) /transl_table=2 /translation="AVPYMGDTLVQWIWGGFSVDNATLTRFFAFHFLLPFIIAAATLL HLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVLMLLALTSLALFSPNLLGDP DNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMVVPILHTSK QRGLTFRPLTQFLFWTLVADMLILTWIGGMPVEHPYVIIGQIASILYFALFLVLVPLA GWLENKALKWA" BASE COUNT 196 a 194 c 107 g 192 t ORIGIN 1 ggcagttcca tacataggag ataccctagt tcagtgaatc tgaggggggt tctcagtaga 61 taacgcaaca ctgacccgat tctttgcatt ccactttctc ctaccattta ttattgccgc 121 cgcaaccctc ctccacctcc tattcctgca cgaaaccgga tcaaataacc cggccggcct 181 aaattcagat gcagacaaaa tctccttcca cccatatttt tcatacaaag accttcttgg 241 attcgtactg atactgctag cactgacatc attagcacta ttttccccaa acctgctcgg 301 agatccagac aattttacac cagccaaccc aatggttacc ccaccacata ttaaaccaga 361 gtgatacttc ctgtttgcct acgccatcct gcgatctatt cctaacaaat taggaggagt 421 tcttgcattg ttattctcaa ttcttatcct aatagtggta ccaatcctgc acacttcaaa 481 acaacgagga ctaacattcc gcccactcac tcagttctta ttctgaactc tagtagcaga 541 tatactgatt ctaacatgaa ttggaggcat acccgtagaa cacccatatg ttattatcgg 601 ccaaattgca tcaatcctat actttgcact tttcctagtg ctggtcccac tagcaggatg 661 actagagaac aaagcactaa aatgagctt //