LOCUS AB426317 689 bp DNA linear VRT 19-AUG-2010 DEFINITION Pseudogobio esocinus mitochondrial cytb gene for cytochrome b, partial cds, haplotype: 1Bw29. ACCESSION AB426317 VERSION AB426317.1 KEYWORDS . SOURCE mitochondrion Pseudogobio esocinus ORGANISM Pseudogobio esocinus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Gobioninae; Pseudogobio. REFERENCE 1 (bases 1 to 689) AUTHORS Tominaga,K., Watanabe,K., Kakioka,R., Mori,S. and Jeon,S.R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2008) to the DDBJ/EMBL/GenBank databases. Contact:Koji Tominaga Kyoto University, Graduate School of Science; Kitashirakawa-Oiwakecho, Kyoto, Kyoto 606-8502, Japan REFERENCE 2 AUTHORS Tominaga,K., Watanabe,K., Kakioka,R., Mori,S. and Jeon,S.-R. TITLE Two highly divergent mitochondrial DNA lineages within Pseudogobio esocinus populations in central Honshu, Japan JOURNAL Ichthyol Res 56, 195-199 (2009) COMMENT FEATURES Location/Qualifiers source 1..689 /collected_by="Koji Tominaga" /collection_date="2007-05-09" /country="Japan:Shiga, Ryuoh, an irrigation ditch, Hino R. system" /db_xref="taxon:418128" /haplotype="1Bw29" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Pseudogobio esocinus" /PCR_primers="fwd_name: L14724, fwd_seq: TGACTTGAARAACCAYCGYYG, rev_name: H15915, rev_seq: ACCTCCGATCTYCGGATTACAAGAC" CDS <1..689 /codon_start=2 /gene="cytb" /note="TAA stop codon is completed by the addition of 3' A residues to the mRNA" /product="cytochrome b" /protein_id="BAG71856.1" /transl_except=(pos:689,aa:TERM) /transl_table=2 /translation="AVPYMGDTLVQWIWGGFSVDNATLTRFFAFHFLLPFIIAAATLL HLLFLHETGSNNPAGLNSDADKISFHPYFSYKDLLGFVLMLLALTSLALFSPNLLGDP DNFTPANPMVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILMVVPILHTSK QRGLTFRPLTQFLFWTLVADMLILTWIGGMPVEHPYVIIGQIASILYFALFLVLVPLA GWLENKALKWA" BASE COUNT 198 a 192 c 105 g 194 t ORIGIN 1 ggcagttcca tacataggag ataccctagt tcaatgaatc tgaggggggt tctcagtaga 61 taacgcaaca ctgacccgat tctttgcatt ccactttctc ctaccattta ttattgccgc 121 cgcaaccctc ctccacctcc tattcctgca cgaaactgga tcaaataacc cagccggcct 181 aaattcagat gcagacaaaa tctccttcca cccatatttt tcatacaaag accttcttgg 241 attcgtactg atgctgctag cactgacatc attagcacta ttttctccaa acctgctcgg 301 agacccagac aattttacac cagccaaccc aatggttacc ccaccacata ttaaaccaga 361 gtgatacttc ctgtttgcct acgccatcct gcgatctatt cctaacaaat taggaggagt 421 tcttgcatta ttattctcaa ttcttatcct aatggtggta ccaatcctgc acacttcaaa 481 acaacgagga ctaacatttc gcccactcac tcagttctta ttctgaactc tagtagcaga 541 tatactgatt ctaacatgaa tcggaggcat acccgtagaa cacccatatg ttattattgg 601 ccaaattgca tcaatcctat actttgcact tttcctagtg ctagtcccac tagcaggatg 661 actagagaac aaagcactaa aatgagctt //