LOCUS AB232783 9238 bp DNA linear PLN 03-AUG-2010 DEFINITION Ipomoea nil genes for Caffeic acid 3-O-methyltransferase, WD40 repeat protein, Hairpin-induced family protein, complete cds, strain:NS/W1ca1. ACCESSION AB232783 VERSION AB232783.1 KEYWORDS . SOURCE Ipomoea nil (Japanese morning glory) ORGANISM Ipomoea nil Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea. REFERENCE 1 (bases 1 to 9238) AUTHORS Morita,Y. TITLE Direct Submission JOURNAL Submitted (24-AUG-2005) to the DDBJ/EMBL/GenBank databases. Contact:Yasumasa Morita National Agriculture and Food Research Organization, National Institute of Floricultural Science; 2-1 Fujimoto, Tsukuba 305-8519, Japan REFERENCE 2 AUTHORS Morita,Y., Saitoh,M., Hoshino,A., Nitasaka,E. and Iida,S. TITLE Isolation of cDNAs for R2R3-MYB, bHLH, and WDR transcriptional regulators and identification of c and ca mutations conferring white flowers in the Japanese morning glory JOURNAL Plant Cell Physiol. 47, 457-470 (2006) COMMENT FEATURES Location/Qualifiers source 1..9238 /db_xref="taxon:35883" /mol_type="genomic DNA" /organism="Ipomoea nil" /strain="NS/W1ca1" CDS join(268..689,2078..2388,2531..2595,2905..3201) /codon_start=1 /product="Caffeic acid 3-O-methyltransferase" /protein_id="BAE94406.1" /transl_table=1 /translation="MGSTGNDSPMTNRVDSDEEASLFAMQLASASVLPMVLKSAIELD LLELIAKAGPGAAVSPSELAAQLPTTNPDAAVMLDRILRLLCTYSVLNCSLRTLPDGR VERLYSLAPVCKYLTKNGDGVSMAPLLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYG MTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILDDYKGFEGLKSLVDVGGGTGATLNM ILSKYPNIKGINFDLPHVIEDSPKYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDAH CLKFLKNCYDALPENGKVIVAECNLPESPDTSLATKNVVHIDVIMLAHNPGGKERTEK EFEALAMGSGFRHFRKACCAVNTWIMEFCK" exon <268..689 /number=1 /product="Caffeic acid 3-O-methyltransferase" intron 690..2077 /number=1 exon 2078..2388 /number=2 /product="Caffeic acid 3-O-methyltransferase" intron 2389..2530 /number=2 exon 2531..2595 /number=3 /product="Caffeic acid 3-O-methyltransferase" intron 2596..2904 /number=3 exon 2905..>3201 /number=4 /product="Caffeic acid 3-O-methyltransferase" CDS 5075..5815 /allele="ca-1" /codon_start=1 /gene="InWDR1" /note="The ca-1 mutation is the frameshift mutation caused by 7-bp insertion (GGAGTAC) in the InWDR1 gene." /product="WD40 repeat protein" /protein_id="BAE94407.1" /transl_table=1 /translation="MENSTQGSNLRSENSVTYESPYPIFAMAVSSFAAAHHGLRRRSV AVGSFLEEYKNRVEILSFEEDTVTLKTNPGLAFDHPYPPTKLMFHPNPTASMKSADLL VSSGDYLRLWEVREASIEPVSTLNNSKTSEYCAPLTSFDWNEVEPRRIGTSSIDTTCT IWDIEKGVVETQLIAHDKEVYDIAWGEAGVFSSVSADGSVRIFDLRDKEHSTIIYGVR EPPTRHPIAQAGLEQARFKVHGDNINGQ" exon <5075..>5815 /gene="InWDR1" /number=1 CDS complement(7212..7835) /codon_start=1 /product="Hairpin-induced family protein" /protein_id="BAE94408.1" /transl_table=1 /translation="MSQINIESPKHCSKREFCIHKKLFFAVVAFLFSILLALIFIVWI SLHPSRPEFSLSEAKINQLNLFTAHLLYSSIQLTLLSKNPNKKIGIYYDEMQVFASYK GQQITVYTSLPPFYQGHEDTNVLSASLTGNGLAVAPSVVYFVQRDQSSGKLVLALKAI GKLRWKVGTWVSGKYRYNVNCIVVVPFGGSSPLSSTRFKQTQCSTTL" exon complement(<7212..>7835) /number=1 /product="Hairpin-induced family protein" BASE COUNT 2807 a 1716 c 1845 g 2870 t ORIGIN 1 tctagagttt aagattagtt tagctaggtt gggaaatcta atataatttt aaaaaaaaaa 61 aaaaatgggt atactatacc aatcattatt taagcgaatt aaaaaaaaaa aaaggttggt 121 gaaccaagtt caaccatata agcagcgatg ctcatcgctc tcatactcaa accgttctct 181 ctcttcttct tcttcttctt cttcttcttc ttcttcttcc attctttctt tctttcacac 241 tacactctgc aatcgcatta agctgaaatg gggtcgaccg gaaacgacag cccgatgaca 301 aaccgggtcg actccgacga agaagccagc ctattcgcta tgcagctcgc cagcgcttcc 361 gttctcccca tggtcctcaa atccgccata gaactcgacc ttctggagct catagccaaa 421 gccgggccgg gagccgccgt ctccccatcg gaactcgcgg cgcagctccc caccactaac 481 ccggacgccg ccgtcatgct ggaccggatc ctccgcctcc tctgcaccta ctccgtcctc 541 aactgctctc tccggaccct ccccgacggc cgggtcgagc ggctctacag cttggccccg 601 gtttgtaagt atttgacaaa gaacggcgac ggcgtttcca tggcgcccct cctcctcatg 661 aatcaagata aagtcctcat ggaaagctgg tatatatata ttccccttct tcttcattca 721 attcttgcat agtacaaatg tttaattagg gatagatgcg aaatgataat aaaataattc 781 atatttttta acttaataat ccataagttt aagtgtgcat tgaacatttg aactcttaat 841 tattaaaata gttattcgga gtgtttggta aataactgtt aactgaatgg agtaggctgt 901 aaaagagcga ctctaaagaa taataacgta aaaaaagtct atatattcaa ttttcttagt 961 aaagagattt tcctagaaaa gtggtaaggt agggcgtgaa gaaagcagat tttaggaaag 1021 tggttcaggt aattcagttg actagttgat ggtattagct gattgtaaaa agatgtttag 1081 taaattagtt gttagctaat agctgattat atataaaatg attttttcaa aaaactgaca 1141 taaaaaattg ttttgaatag ttttttaaat tgttgtgttt tgttaaaaaa aactaattaa 1201 ttaaatattg atattgattg tttaatcaag ttaaataatt attaatagtc aaatgaatca 1261 aaattgatta atagactaac tattttacta gacaagttca taataactca aaatttaaaa 1321 taattgaatt ttttatgact tcataaatga taattgatga gaattttcaa ttgatgtaac 1381 tatgaaggtt tatttagtct attagcatat ctttgtaggc ggttagtgag gatatgattg 1441 ctgtagggct ggagtgcaga caagtggcca aaataatagt attatatata ctaggttagg 1501 tgacatgtcg tatagaaaaa taaaacaatg tttaaaaaca gagacaattt ggaacaaaac 1561 agcacccact acactgaaag gaatcatcta cctaacccca gactggtata ctgttgatga 1621 tatggttggc agttggacca aagctgaaaa caggcacttg ataatgttct ccattaacta 1681 acctcttgaa attgttgttt tcttgcatgt gttgattgct taacattttg gtatatacta 1741 tatattagag tggttgggtg actaatgatg gggatactag atttgaatgt gaagtgtaaa 1801 ttaataacac cttttaatgt taaagaataa caattttgga aatagattta tttcatcttg 1861 atttaatatt cagaaatatt attatcaaga atgtgttatt tcctttttac gagggaatga 1921 tcataccaac aaggagttct atatataagt atcttataaa cagtcattag tcatttgttc 1981 aagaaatgac gtcattgaaa tatatatata tatatatata tatatatata tatatatata 2041 tattagctac taatttaatt gataaatgat tatataggta ccacttaaaa gatgccgtgc 2101 ttgagggtgg aattccattc aacaaggcat atggaatgac tgcatttgag taccacggaa 2161 cagatccaag attcaacaag gttttcaacc gtggaatgtc tgaccactcc acgattacca 2221 tgaagaagat tctcgatgat tacaaaggat tcgagggcct caagtcccta gtagatgttg 2281 gtggtggaac cggtgccacg cttaacatga tactctccaa atatcccaac attaagggca 2341 tcaacttcga tttgcctcat gttattgagg attctcctaa atatcctggt acatttatat 2401 ataaaacata ttgatcttat tatcatagga ctaatcctac ttttccctct ttgtcttaaa 2461 caacttttcc atttttaaat tagtcgtcaa ttataaaaca atcaatatta attttcgata 2521 tgttgcgtag ggattgagca cgttggagga gacatgttcg ttagcgtgcc taaaggggat 2581 gccattttca tgaaggtaaa acacgaaccc ttaaatcttt attgttttcg atcttctaca 2641 atcaggtgag aacaacttta aactgcaaac tgtgaacttt tgaaggatta caccgtaccg 2701 ggatacaatt gcactgcaag gtcctactga gctgtagtag gcaatcatgt aatagttacc 2761 gtgcaatctt tcacaagttc gcagtttgtt ggttctcgcc ggattatata tatatatata 2821 tatatatata tatatatata tatatatata tatatgtttg taatttggaa tataatgtgg 2881 tgtccgatat gatccgatcc gcagtggatc tgtcacgact ggagcgacgc ccactgcctg 2941 aaattcttga agaactgcta cgatgccctt ccagaaaacg gcaaagtgat cgtggcagag 3001 tgcaaccttc cagaatctcc ggacacctcg ctggcgacca agaacgtcgt ccacattgac 3061 gttatcatgt tggcgcataa tcccggcggc aaagagagga ccgagaagga gttcgaggcg 3121 ctggcgatgg gctctggttt ccgacacttc cgcaaggctt gctgcgccgt caacacttgg 3181 atcatggaat tctgcaaatg atatgatcca atccaatcaa atttgcaggt ttttttaagg 3241 atcccatgca tccagtgttt gtcgtgaaga ttgatgatga tgatgatgat gatgatgatg 3301 atgagtctaa tttcctctat taatttcacc aaaatggctt ttctagtttt cacagaatgg 3361 aataataaag ctatctgcac cctgcttctg atcttttcat tattgtatac atactacact 3421 atatattttg ttgccaagtt tgaactcatt gtatatttga tcatatcata ctttaccact 3481 attactgatt atataataaa gaaaattatg ttttcatgaa tcatgacttc tacttatttt 3541 taatttttat tttttggtga ctatatggaa acctgcaatc actatcatgg ccttttgttt 3601 ctctacacgt gcaaggctca actaatacat taacgactcg tctgattggc tagaaaatat 3661 ttaaacggaa atggattgaa atttcattga aaattaaatt ctaaaaaaat agattccatt 3721 gtttggttag tgaaaaaaaa aatttattga aaatatgaat ctcattgttt gattttggaa 3781 gttaaagaat aatgggtgta aagacaatta taccctacag aataataatg ttaattaata 3841 aaagttgata acgacataat tatcctattt tctatgaaaa ataaaatacc tcaggagaat 3901 catagaaaat gttttcctta tttttaaaga aatatttttc tgtgaaaatg ttttcatgaa 3961 ccaaataaaa gaaaaagtca atttttctca aattcaagaa aaacattttt ttaaaaaaat 4021 aattttcagc aacttaaaat tttaccaatt ataataaaac gtgttaagta aaacaaatgt 4081 agtccacacg ttttctgcta ttttaattat cttactaatg aattgtcaaa atggcattag 4141 ctcaaagtcc atattggtag taggtgaaac tttagcctag ccaagaagag tggagagagg 4201 tggagcccat gcatatggaa tcaaggataa gtaatttaat cctaattact tatacaatac 4261 cacctaatat tttactttga ataatactaa actttgaata ttaaaaatct cttaaacttc 4321 taatgtcttt ggtctttgat tgggaaccag cacatcgtta tcaactttaa atttttttat 4381 aaaaaattca tcatttaaaa ttagagctaa ttaatactaa taagtaatta gaaacaaact 4441 ttaatgttta ttgccctttt tgagtaattt acactagtta cattttcaac gtttcgttgc 4501 agtcgtttgt gcgggatatt atattattta ctcgtatata ttgtaaagtt tttaaaaata 4561 tatcaaataa aaataacagt atttacgtga aaacaattgt gacagcgttt aataagagtt 4621 gttatatggg tggatagcaa atttgcaatg cattgatgaa ttacaagaaa agtgagagag 4681 attgggagtg aaatgatgag tctaccaatt tgaatccact agggggtgtg gtgttatgag 4741 attgaacaat aaggttgaaa tatgtaatta agtgaaagaa cagggttatg agtgtcattt 4801 aggatgctta ttgggccgct taacttgatg gttagtaata gaaataagcc cagtagattc 4861 cggcccaagt tactgagtca aggcccaaag ctgtcaagaa tgactggggc aaaggctgag 4921 tggctgagtc aatcgacgcg ttataactta ttatcacatg ttcacaatca cacttctctc 4981 tcgggttata taagccaccg gcgagccaac ttccggtaaa aaaccggccg gcgattcaac 5041 gctccgagga aaaatcaaat tttaacccac aaagatggag aactcaaccc aaggatcgaa 5101 tctcagatcc gagaattccg tgacctatga gtctccctac cccattttcg ccatggccgt 5161 gtcctccttc gccgccgccc accatggcct ccggcgacgc agcgtcgccg tcggcagctt 5221 cctcgaagag tacaaaaacc gggtcgaaat cctctccttc gaagaagata ccgtcactct 5281 gaaaaccaac ccggggctag ccttcgatca cccttaccct cccacgaagc tcatgttcca 5341 tcctaatccc acggcgtcaa tgaagtccgc cgatctccta gtgtcctccg gcgactacct 5401 ccgtctctgg gaggttcgag aagcttccat tgagcccgtt tcgaccctca acaatagcaa 5461 aaccagtgaa tactgcgccc cattgacctc cttcgattgg aacgaggtgg agccgcggcg 5521 aatcggaact tcaagtattg ataccacctg taccatctgg gatatcgaga agggcgttgt 5581 ggaaacccaa ttgatcgccc acgataaaga ggtttacgac atagcctggg gggaagccgg 5641 ggttttctct tcggtttcgg ctgacgggtc ggttcggatc ttcgatctga gagacaaaga 5701 acactccaca atcatatacg gagtacgaga gcccccaacc cgacacccca ttgctcaggc 5761 tggcttggaa caagcaagat ttaaggtaca tggcgacaat attaatggac agtaacaaag 5821 ttgtaatctt ggacatcagg tcacctgcaa tgccggtggc tgagctggag aggcacaatg 5881 ctagtgtgaa cgccattgct tgggctcctc agagctccag gcacatctct tctgccggag 5941 atgatggcca ggcgcttatc tgggaattgc ccacagttgc aggcccaaat gggattgacc 6001 ccatgtcaat gtactcagct ggggctgaga ttaaccagct tcaatggtct gctgctcagc 6061 ctgactggat tgccattgcg ttttctaaca agcttcagat gctaaaagtg taaggagatg 6121 ataaagattg cacctttact aggttgtagc agtggtagtt aatgggttag ttatgtattg 6181 ttaagtagtg ttgtttggta tgtgtctgta attggttatc tgttaatggg tttgttgaat 6241 gttggaacac ttgtattact ccccacttga ttaatataat ttcttgaata tgattatatg 6301 ttctgtcagt ttctgtcatt ccttgcttga gcattgccta acaactcatg tcagtttctg 6361 tcattccttg cttgagcatt gcctaacaac tcaagtgaat tgagccattg ctgttatttg 6421 ggaaagtcaa tagtaaatga tctgtttatg cttctcaagt gcttttgcag aatgttgcta 6481 catctgtttc cctatatata tagttctttt tcttttctta ttttttgata cattaggttt 6541 cagtttatgt catacttagt cttgtcacta tggcttctgc caacttgggg agtccaatct 6601 ccaatctagg gagcccaagg gcctaaactc tagcttgggg agtcctaact ctaagatgtt 6661 ggtgggagtc gaactcctat cttgccgcta gagtgttgac tttaggtcag gtgatcgacc 6721 acttgaaaca tgatatatat agttcttttt cttttcttta aagggtggct ttcatgtcaa 6781 aaagtaaggt gcttgagtag gttataggtg gaatctggtg cttcaactct tattttgctg 6841 tagccattat ctgcataaaa ttttctttct actgttgtga tgttctgttt gttcttttta 6901 gacagtccac ctcccagtat ccatatttga cacagcaata gtttgtggat gacttttgtc 6961 cattggagtt ttgcttttat acctcagata agctcaccat tatactgagg gatctgtaaa 7021 tgtgaattga tggaaaaaaa tggcttaatt tggggggaaa tatcagtatt ccatgaagtc 7081 cactgttcat ttggtgtgtt tagataaata tactcatgtt attaactcag ttaagtgacc 7141 agatttgata cagaaacagt aaaagagtag agaacaatac agttcattag aagagcaaaa 7201 gatatcaatt tttaaagtgt agtagagcac tgagtttgct taaaccttgt agaacttaat 7261 ggtgaagaac ctccaaaagg caccacaaca atgcagttta cattatacct atatttccca 7321 gaaacccaag tccccacctt ccatctcagc ttcccaattg ccttcagagc caagaccagc 7381 tttccagaac tttgatctcg ctgcacgaaa taaacaacag aaggagccac agccaaccca 7441 ttccctgtca aagatgcaga aagaacgttg gtgtcttcgt gcccttgata aaatggagga 7501 agagaggtgt aaacggtgat ctgctgcccc ttgtaggatg cgaaaacttg catttcgtcg 7561 tagtagatgc ctattttctt gtttgggttc ttggagagca gggtgagttg aatggaggag 7621 taaagaaggt gagcagtgaa gaggttgagt tgatttattt tagcttctga gagagagaac 7681 tctggcctag aggggtgcag acttatccaa acaatgaaga tgagtgctaa taggatagag 7741 aacagaaagg caacgacagc aaagaaaagc ttcttgtgga tgcaaaattc tctcttggag 7801 cagtgtttag gagattctat gttgatctga gacatctgca gagcaagaat ggactgaagg 7861 attgcagtct tgggggtaga ggtaggggag ttaacttaca atgccaagga atgagagcag 7921 tgatggtgct aatcaatata agtagtgttc aagtggtcga tcccttgacc taaagtcagc 7981 actccagtgg cagagattgc tctcgcgatt tacctcatcc agcaactcgg gagtgttcat 8041 atttcttaag ttgcagaaag tatataagga gtgttcaagt ggtcgatcac ctgacctaaa 8101 gtcagcactc cagcggcaga gattgctctc gcgatttacc tcatctagcg actcgggagt 8161 gtcatatttt ttaagttgta gaaagtatac aaggagtgtt caagtggtcg atcacctgac 8221 ctaaagtcag cactccaggg gcagagagac tgatcttgtg atttacctca tccagcgact 8281 cgggagtgtc atatttctta agttttagaa gtatataagg agtgttcaag tggtcgatca 8341 cccgacctaa agtcagcact ccagcggcag agactactct cgccatttac ctcatctagc 8401 aactcgggag tgttcatatt tcttaagttg cagaaagtat ataaggagtg ttcaagtagt 8461 tgatcaccta acctaaagtc agcactccag cgacagagag actgctctcg tgatttacct 8521 catctagcga ctcgggagtg ttcatatttc ttaagttgca gaaagtatat caatcatatt 8581 gtactagctt ttgtcacttt tggagttttg gtaagcagat atgcattttt catagattta 8641 gcatcatgtt agtggactgt cactttacac aactcatgag caaactcttc aaaagattga 8701 tgaaagttag aaccacaata agtttttgta cataggcaat gccatggtgt tcatccacta 8761 caagttgtgt atcgcgattg gtgattcgct ttcccttccc cgaggtaggg cagacacatt 8821 tctgatgatg aatatgcatg tagtttggta tgaatctgta aagttcacaa gcaagaaaaa 8881 tatgcagata aagtaaagcc ttttaagttc atcttccctt tctgtaaaag cttatcagtt 8941 tcacttttag agttctttga atatgaaaga gaatttcaag aaaaccaaca tatgtagatc 9001 aacttttcct tgttttctcc aaaaacagac atcatagtct ctgctaataa ctgctgtaac 9061 taacaagctt ctactgatta tacaggcgtt gcgatataca atcgtgctac ttcttaatgg 9121 ttataagaag cggtgacatg aagcgtttat aatgaaagaa taggagttct ggttagtggc 9181 tatcctacag gtcaaattcc aacatcgggt tatagtgttg gaaagctttt atctcgag //