LOCUS AB232782 9256 bp DNA linear PLN 03-AUG-2010 DEFINITION Ipomoea nil genes for Caffeic acid 3-O-methyltransferase, WD40 repeat protein, Hairpin-induced family protein, complete cds, strain:TKS. ACCESSION AB232782 VERSION AB232782.1 KEYWORDS . SOURCE Ipomoea nil (Japanese morning glory) ORGANISM Ipomoea nil Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea. REFERENCE 1 (bases 1 to 9256) AUTHORS Morita,Y. TITLE Direct Submission JOURNAL Submitted (24-AUG-2005) to the DDBJ/EMBL/GenBank databases. Contact:Yasumasa Morita National Agriculture and Food Research Organization, National Institute of Floricultural Science; 2-1 Fujimoto, Tsukuba 305-8519, Japan REFERENCE 2 AUTHORS Morita,Y., Saitoh,M., Hoshino,A., Nitasaka,E. and Iida,S. TITLE Isolation of cDNAs for R2R3-MYB, bHLH, and WDR transcriptional regulators and identification of c and ca mutations conferring white flowers in the Japanese morning glory JOURNAL Plant Cell Physiol. 47, 457-470 (2006) COMMENT FEATURES Location/Qualifiers source 1..9256 /db_xref="taxon:35883" /mol_type="genomic DNA" /organism="Ipomoea nil" /strain="TKS" CDS join(266..687,2093..2403,2546..2610,2940..3236) /codon_start=1 /product="Caffeic acid 3-O-methyltransferase" /protein_id="BAE94403.1" /transl_table=1 /translation="MGSTGNDSPMTNRVDSDEEASLFAMQLASASVLPMVLKSAIELD LLELIAKAGPGAAVSPSELAAQLPTTNPDAAVMLDRILRLLCTYSVLNCSLRTLPDGR VERLYSLAPVCKYLTKNGDGVSMAPLLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYG MTAFEYHGTDPRFNKVFNRGMSDHSTITMKKILDDYKGFEGLKSLVDVGGGTGATLNM ILSKYPNIKGINFDLPHVIEDAPKYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDAH CLKFLKNCYDALPENGKVIVAECNLPESPDTSLATKNVVHIDVIMLAHNPGGKERTEK EFEALAMGSGFRHFRKACCAVNTWIMEFCK" exon <266..687 /number=1 /product="Caffeic acid 3-O-methyltransferase" intron 688..2092 /number=1 exon 2093..2403 /number=2 /product="Caffeic acid 3-O-methyltransferase" intron 2404..2545 /number=2 exon 2546..2610 /number=3 /product="Caffeic acid 3-O-methyltransferase" intron 2611..2939 /number=3 exon 2940..>3236 /number=4 /product="Caffeic acid 3-O-methyltransferase" CDS 5100..6131 /codon_start=1 /gene="InWDR1" /note="Ca" /product="WD40 repeat protein" /protein_id="BAE94404.1" /transl_table=1 /translation="MENSTQGSNLRSENSVTYESPYPIFAMAVSSFAAAHHGLRRRSV AVGSFLEEYKNRVEILSFEEDTVTLKTNPGLAFDHPYPPTKLMFHPNPTASMKSADLL VSSGDYLRLWEVREASIEPVSTLNNSKTSEYCAPLTSFDWNEVEPRRIGTSSIDTTCT IWDIEKGVVETQLIAHDKEVYDIAWGEAGVFSSVSADGSVRIFDLRDKEHSTIIYESP QPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPAMPVAELERHNASVNAIAWAP QSSRHISSAGDDGQALIWELPTVAGPNGIDPMSMYSAGAEINQLQWSAAQPDWIAIAF SNKLQMLKV" exon <5100..>6131 /gene="InWDR1" /number=1 CDS complement(7230..7853) /codon_start=1 /product="Hairpin-induced family protein" /protein_id="BAE94405.1" /transl_table=1 /translation="MSQINIESPKHCSKREFCIHKKLFFAVVAFLFSILLALIFIVWI SLHPSRPEFSLSEAKINQLNLFTAHLLYSSIQLTLLSKNPNKKIGIYYDEMQVFASYK GQQITVYTSLPPFYQGHEDTNVLSASLTGNGLAVAPSVVYFVQRDQSSGKLVLALKAI GKLRWKVGTWVSGKYRYNVNCIVVVPFGGSSPLSSTRFKQTQCSTTL" exon complement(<7230..>7853) /number=1 /product="Hairpin-induced family protein" BASE COUNT 2816 a 1717 c 1840 g 2883 t ORIGIN 1 tctagagttt aagattagtt tagctaggtt gggaaatcta atataatttt tttaaaaaaa 61 aaaaatgggt atactatacc aatcattatt taagcgaatt aaaaaaaaaa aaaaggttgg 121 tgaaccaagt tcaaccatat aagcagcgat gctcatcgct ctcatactca aaccgttctc 181 tctcttcttc ttcttcttct tcttcttctt cttcttccat tctttctttc tttcacacta 241 cactctgcaa tcgcattaag ctgaaatggg gtcgaccgga aacgacagcc cgatgacaaa 301 ccgggtcgac tccgacgaag aagccagcct attcgctatg cagctcgcca gcgcttccgt 361 tctccccatg gtcctcaaat ccgccataga actcgacctt ctggagctca tagccaaagc 421 cgggccggga gccgccgtct ccccatcgga actcgcggcg cagctcccca ccactaaccc 481 ggacgccgcc gtcatgctgg accggatcct ccgcctcctc tgcacctact ccgtcctcaa 541 ctgctctctc cggaccctcc ccgacggccg ggtcgagcgg ctctacagct tggccccggt 601 ttgtaagtat ttgacaaaga acggcgacgg cgtttccatg gcgcccctcc tcctcatgaa 661 tcaagataaa gtcctcatgg aaagctggta tatatatatt ccccttcttc ttcattcaat 721 tcttgcatag tacaaatgtt taattaggga tagatgcgaa atgataataa aataattcat 781 attttttaac ttaataatcc ataagtttaa gtgtgcattg aacatttgaa ctcttaatta 841 ttaaaatagt tattcggagt gtttggtaaa taactgttaa ctgaatggag taggctgtaa 901 aagagcgact ctaaagaata ataacgtgaa aaaagtctat atattcaatt ttcttagtaa 961 agagattttc ctagaaaagt ggtaaggtag ggcgtgaaga aagcagattt taggaaagtg 1021 gttcaggtaa ttcagttgac tagttgatgg tattagctga ttgtaaaaag atgtttagta 1081 aattagttgt tagctaatag ctgattatat ataaaatgat tttttcaaaa aactgacata 1141 aaaaattgtt ttgaatagtt ttttaaattg ttgtgttttg ttacaaaaaa actaattaat 1201 taaatattga tattgattgt ttaatcaagt taaataatta ttaatagtca aatgaatcaa 1261 aattgattaa tagactaact attttactag acaagttcat aataactcaa aatttaaaat 1321 aattgaattt tttatgactt cataaatgat aattgatgag aattttcaat tgatgtaact 1381 atgaaggttt atttagtcta ttagcatatc tttgtaggcg gttagtgagg atatgattgc 1441 tgtagggctg gagtgcagac aagtggccaa aataatagta ttatatatat actaggttag 1501 gtgacatgtc gtatagaaaa ataaaacaat gtttaaaaac agagacaatt tggaacaaaa 1561 cagcacccac tacactgaaa ggaatcatct acctaacccc agactggtat actgttgatg 1621 atatggttgg cagttggacc aaagctgaaa acaggcactt gataatgttc tccattaact 1681 aacctcttga aattgttgtt ttcttgcatg tgttgattgc ttaacatttt ggtatatact 1741 atatattaga gtggttgggt gactaatgat ggggatacta gatttgaatg tgaagtgtaa 1801 attaataaca ccttttaatg ttaaagaata acaattttgg aaatagattt atttcatctt 1861 gatttaatat tcagaaatat tattatcaag aatgtgttat ttccttttta cgagggaatg 1921 atcataccaa caaggagttc tatatataag tatcttataa acagtcatta gtcatttgtt 1981 caagaaacga cgtcattgaa atatatatat atatatatat atatatatat atatatatat 2041 atatatatat atatatatta gctactaatt taattgataa atgattatat aggtaccact 2101 taaaagatgc cgtgcttgag ggtggaattc cattcaacaa ggcatatgga atgactgcat 2161 ttgagtacca cggaacagat ccaagattca acaaggtttt caaccgtgga atgtctgacc 2221 actccacgat taccatgaag aagattctcg atgattacaa aggattcgag ggcctcaagt 2281 ccctagtaga tgttggtggt ggaaccggtg ccacgcttaa catgatactc tccaaatatc 2341 ccaacattaa gggcatcaac ttcgatttgc ctcatgttat tgaggatgct cctaaatatc 2401 ctggtacatt tatatataaa acatattgat cttattatca taggactaat cctacttttc 2461 cctctttgtc ttaaacaact tttccatttt taaattagtc gtcaattata aaacaatcaa 2521 tattaatttt cgatatgttg cgtagggatt gagcacgttg gaggagacat gttcgttagc 2581 gtgcctaaag gggatgccat tttcatgaag gtaaaacacg aacccttaaa tctttattgt 2641 tttcgatctt ctacaatcag gtgagaacaa ctttaaactg caaactgcga acttttgaag 2701 gattacaccg taccgggata caattgcact gcaaggtcct actgagctgt agtaggcaat 2761 catgtaatag ttaccgtgca atctttcaca agttcgcagt ttgttggttc tcgccggatt 2821 atatatatat atatatatat atatatatat atatatatat atatatatat atatatatat 2881 atatatatat gtttgtaatt tggaatataa tgtggtgtcc gatatgatcc gatccgcagt 2941 ggatctgtca cgactggagc gacgcccact gcctgaaatt cttgaagaac tgctacgatg 3001 cccttccaga aaacggcaaa gtgatcgtgg cagagtgcaa ccttccagaa tctccggaca 3061 cctcgctggc gaccaagaac gtcgtccaca ttgacgttat catgttggcg cataatcccg 3121 gcggcaaaga gaggaccgag aaggagttcg aggcgctggc gatgggctct ggtttccgac 3181 acttccgcaa ggcttgctgc gccgtcaaca cttggatcat ggaattctgc aaatgatatg 3241 atccaatcca atcaaatttg caggtttttt taaggatccc atgcatccag tgtttgtcgt 3301 gaagattgat gatgatgatg atgatgatga gtctaatttc ctctattaat ttcaccaaaa 3361 tggcttttct agttttcaca gaatggaata ataaagctat ctgcaccctg cttctgatct 3421 tttcattatt gtatacatac tacactatat attttgttgc caagtttgaa ctcattgtat 3481 atttgatcat atcatacttt accactatta ctgattatat aataaagaaa attatgtttt 3541 catgaatcat gacttctact tatttttaat ttttattttt tggtgactat atggaaacct 3601 gcaatcacta tcatggcctt ttgtttctct acacgtgcaa ggctcaacta atacattaac 3661 gactcgtctg attggctaga aaatatttaa acggaaatgg attgaaattt cattgaaaat 3721 taaattctaa aaaaatagat tccattgttt ggttagtgaa aaaaaaaatt attgaaaata 3781 tgaatctcat tgtttgattt tggaagttaa agaataatgg gtataaagac aattataccc 3841 tacagaataa taatgttaat taataaaagt tgataacgac ataattatcc tattttctat 3901 gaaaaataaa atacctcagg agaatcatag aaaatgtttt ccttattttt aaagaaatat 3961 ttttctgtga aaatattttc atgaaccaaa taaaagaaaa agtcaatttt tctcaaattc 4021 aagaaaaaca ttttttttaa aaaataattt tcagcaactt aaaattttac caattataat 4081 aaaacgtgtt aagtaaaaca aatgtagtcc acacgttttc tgctatttta attatcttac 4141 taatgaattg tcaaaatggc attagctcaa agtccatatt ggtagtaggt gaaactttag 4201 cctagccaag aagagtggag agaggtggag cccatgcata tggaatcaag gataagtaat 4261 ttaatcctaa ttacttatac aataccacct aatattttac tttgaataat actaaacttt 4321 gaatattaaa aatctcttaa acttctaatg tctttggtct ttgattggga accagcacat 4381 cgttatcaac tttaaatttt tttataaaaa attcatcatt taaaattaga gctaattaat 4441 actaataagt aattagaaac aaactttaat gtttattgcc ctttttgagt aatttacact 4501 agttacattt tcaacgtttc gttgcagtcg tttgtgcggg atattatatt atttactcgt 4561 atatattgta aagtttttaa aaatatatca aataaaaata acagtattta cgtgaaaaca 4621 attgtgacag cgtttaataa gagttgttat atgggtggat tgcaaatttg caatgcattg 4681 atgaattaca agaaaagtga gagagattgg gagtgaaatg atgagtctac caatttgaat 4741 ccactagggg gtgtggtgtt atgagattga acaataaggt tgaaatatgt aattaagtga 4801 aagaacaggg ttatgagtgt catttaggat gcttattggg ccgcttaact tgatggttag 4861 taatagaaat aagcccagta gattccggcc caagttactg agtcaaggcc caaagctgtc 4921 aagaatgact ggggcaaagg ctgagtggct gagtcaatcg acgcgttata acttattatc 4981 acatgttcac aatcacactt ctctctcggg ttatataagc caccggcgag ccaacttccg 5041 gtaaaaaacc ggccggcgat tcaacgctcc gaggaaaaat caaattttaa cccacaaaga 5101 tggagaactc aacccaagga tcgaatctca gatccgagaa ttccgtgacc tatgagtctc 5161 cctaccccat tttcgccatg gccgtgtcct ccttcgccgc cgcccaccat ggcctccggc 5221 gacgcagcgt cgccgtcggc agcttcctcg aagagtacaa aaaccgggtc gaaatcctct 5281 ccttcgaaga agataccgtc actctgaaaa ccaacccggg gctagccttc gatcaccctt 5341 accctcccac gaagctcatg ttccatccta atcccacggc gtcaatgaag tccgccgatc 5401 tcctagtgtc ctccggcgac tacctccgtc tctgggaggt tcgagaagct tccattgagc 5461 ccgtttcgac cctcaacaat agcaaaacca gtgaatactg cgccccattg acctccttcg 5521 attggaacga ggtggagccg cggcgaatcg gaacttcaag tattgatacc acctgtacca 5581 tctgggatat cgagaagggc gttgtggaaa cccaattgat cgcccacgat aaagaggttt 5641 acgacatagc ctggggggaa gccggggttt tctcttcggt ttcggctgac gggtcggttc 5701 ggatcttcga tctgagagac aaagaacact ccacaatcat atacgagagc ccccaacccg 5761 acaccccatt gctcaggctg gcttggaaca agcaagattt aaggtacatg gcgacaatat 5821 taatggacag taacaaagtt gtaatcttgg acatcaggtc acctgcaatg ccggtggctg 5881 agctggagag gcacaatgct agtgtgaacg ccattgcttg ggctcctcag agctccaggc 5941 acatctcttc tgccggagat gatggccagg cgcttatctg ggaattgccc acagttgcag 6001 gcccaaatgg gattgacccc atgtcaatgt actcagctgg ggctgagatt aaccagcttc 6061 aatggtctgc tgctcagcct gactggattg ccattgcgtt ttctaacaag cttcagatgc 6121 taaaagtgta aggagatgat aaagattgca cctttactag gttgtagcag tggtagttaa 6181 tgggttagtt atgtattgtt aagtagtgtt gtttggtatg tgtctgtaat tggttatctg 6241 ttaatgggtt tgttgaatgt tggaacactt gtattactcc ccacttgatt aatataattt 6301 cttgaatatg attatatgtt ctgtcagttt ctgtcattcc ttgcttgagc attgcctaac 6361 aactcatgtc agtttctgtc attccttgct tgagcattgc ctaacaactc aagtgaattg 6421 agccattgct gttatttggg aaagtcaata gtaaatgatc tgtttatgct tctcaagtgc 6481 ttttgcagaa tgttgctaca tctgtttccc tatatatata gttctttttc ttttcttatt 6541 ttttgataca ttaggtttca gtttatgtca tacttagtct tgtcactatg gcttctgcca 6601 acttggggag tccaatctcc aatctaggga gcccaagggc ctaaactcta gcttggggag 6661 tcctaactct aagatgttgg tgggagtcga actcctatct tgccgctaga gtgttgactt 6721 taggtcaggt gatcgaccac ttgaaacatg atatatatag ttctttttct tttctttaaa 6781 gggtggcttt catgtcaaaa agtaaggtgc ttgagtaggt tataggtgga atctggtgct 6841 tcaactctta ttttgctgta gccattatct gcataaaatt ttctttctac tgttgtgatg 6901 ttctgtttgt tctttttaga cagtccacct cccagtatcc atatttgaca cagcaatagt 6961 ttgtggatga cttttgtcca ttggagtttt gcttttatac ctcagataag ctcaccatta 7021 tactgaggga tctgtaaatg tgaattgatg gaaaaaaatg gcttaatttg gggggaaata 7081 tcagtattcc atgaagtcca ctgttcattt ggtgtgttta gataaatata ctcatgttat 7141 taactcagtt aagtgaccag atttgataca gaaacagtaa aagagtagag aacaatacag 7201 ttcattagaa gagcaaaaga tatcaatttt taaagtgtag tagagcactg agtttgctta 7261 aaccttgtag aacttaatgg tgaagaacct ccaaaaggca ccacaacaat gcagtttaca 7321 ttatacctat atttcccaga aacccaagtc cccaccttcc atctcagctt cccaattgcc 7381 ttcagagcca agaccagctt tccagaactt tgatctcgct gcacgaaata aacaacagaa 7441 ggagccacag ccaacccatt ccctgtcaaa gatgcagaaa gaacgttggt gtcttcgtgc 7501 ccttgataaa atggaggaag agaggtgtaa acggtgatct gctgcccctt gtaggatgcg 7561 aaaacttgca tttcgtcgta gtagatgcct attttcttgt ttgggttctt ggagagcagg 7621 gtgagttgaa tggaggagta aagaaggtga gcagtgaaga ggttgagttg atttatttta 7681 gcttctgaga gagagaactc tggcctagag gggtgcagac ttatccaaac aatgaagatg 7741 agtgctaata ggatagagaa cagaaaggca acgacagcaa agaaaagctt cttgtggatg 7801 caaaattctc tcttggagca gtgtttagga gattctatgt tgatctgaga catctgcaga 7861 gcaagaatgg actgaaggat tgcagtcttg ggggtagggg taggggagtt aacttacaat 7921 gccaaggaat gagagcagtg atggtgctaa tcaatataag tagtgttcaa gtggtcgatc 7981 ccttgaccta aagtcagcac tccagtggca gagattgctc tcgcgattta cctcatccag 8041 caactcggga gtgttcatat ttcttaagtt gcagaaagta tataaggagt gttcaagtgg 8101 tcgatcacct gacctaaagt cagcactcca gcggcagaga ttgctctcgc gatttacctc 8161 atctagcgac tcgggagtgt catatttttt aagttgtaga aagtatacaa ggagtgttca 8221 agtggtcgat cacctgacct aaagtcagca ctccaggggc agagagactg atcttgtgat 8281 ttacctcatc cagcgactcg ggagtgtcat atttcttaag ttttagaagt atataaggag 8341 tgttcaagtg gtcgatcacc cgacctaaag tcagcactcc agcggcagag actactctcg 8401 ccatttacct catctagcaa ctcgggagtg ttcatatttc ttaagttgca gaaagtatat 8461 aaggagtgtt caagtagttg atcacctaac ctaaagtcag cactccagcg acagagagac 8521 tgctctcgtg atttacctca tctagcgact cgggagtgtt catatttctt aagttgcaga 8581 aagtatatca atcatattgt actagctttt gtcacttttg gagttttggt aagcagatat 8641 gcatttttca tagatttagc atcatgttag tggactgtca ctttacacaa ctcatgagca 8701 aactcttcaa aagattgatg aaagttagaa ccacaataag tttttgtaca taggcaatgc 8761 catggtgttc atccactaca agttgtgtat cgcgattggt gattcgcttt cccttccccg 8821 aggtagggca gacacatttc tgatgatgaa tatgcatgta gtttggtatg aatctgtaaa 8881 gttcacaagc aagaaaaata tgcagataaa gtaaagcctt ttaagttcat cttccctttc 8941 tgtaaaagct tatcagtttc acttttagag ttctttgaat atgaaagaga atttcaagaa 9001 aaccaacata tgtagatcaa cttttccttg ttttctccaa aaacagacat catagtctct 9061 gctaataact gctgtaacta acaagcttct actgattata caggcgttgc gatatacaat 9121 cgtgctactt cttaatggtt ataagaagcg gtgacatgaa gcgtttataa tgaaagaata 9181 ggagttctgg ttagtggcta tcctacaggt caaattccaa catcgggtta tagtgttgga 9241 aagcttttat ctcgag //