LOCUS AB198971 1120 bp DNA linear VRT 14-DEC-2022 DEFINITION Rhynchocypris jouyi mitochondrial cytb gene for cytochrome b, partial cds, isolate: Yoshino R1. ACCESSION AB198971 VERSION AB198971.1 KEYWORDS . SOURCE mitochondrion Rhynchocypris jouyi ORGANISM Rhynchocypris jouyi Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pseudaspininae; Rhynchocypris. REFERENCE 1 (bases 1 to 1120) AUTHORS Sasaki,T. and Naoto,H. TITLE Direct Submission JOURNAL Submitted (12-JAN-2005) to the DDBJ/EMBL/GenBank databases. Contact:Takeshi Sasaki National Institute for Basic Biology, Division of Speciation Mechanism; 38 Nishigonaka, Myodaiji-cho, Okazaki, Aichi 444-8585, Japan REFERENCE 2 AUTHORS Sasaki,T., Kartavtsev,Y.P., Chiba,S.N., Uematsu,T., Sviridov,V.V. and Hanzawa,N. TITLE Genetic divergence and phylogenetic independence of Far Eastern species in subfamily Leuciscinae (Pisces: Cyprinidae) inferred from mitochondrial DNA analyses JOURNAL Genes Genet. Syst. 82, 329-340 (2007) COMMENT FEATURES Location/Qualifiers source 1..1120 /country="Japan: Kochi, Yoshino River" /db_xref="taxon:3004155" /isolate="Yoshino R1" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Rhynchocypris jouyi" CDS <1..>1120 /codon_start=2 /gene="cytb" /product="cytochrome b" /protein_id="BAF81976.1" /transl_table=2 /translation="HPLMKIANHALVDLPTPSNISALWNFGSLLGLCLITQILTGLFL AMHYTSDISTAFSSVAHICRDVNYGWLIRSLHANGASFFFICIYMHIARGLYYGSYLY KETWNIGVVLLLLVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGDTLVQWIWGG FSVDNATLTRFFAFHFLLPFIIAGATILHLLFLHETGSNNPAGLNSDADKISFHPYFS YKDLLGFVVMLLALTSLALFSPNLLEDPDNFTPANPLVTPPHIQPEWYFLFAYAILRS IPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPMTQFLFWTLVADMLILTWIGGM PVEHPYVIIGQVASTLYFALFLILVPLAGWVENKALKWT" BASE COUNT 297 a 303 c 182 g 338 t ORIGIN 1 ccacccgtta ataaaaatcg ctaatcatgc attagttgat ctcccaacac cctccaatat 61 ttcagcgctt tgaaatttcg gctccctact agggttatgc ttaattaccc aaatccttac 121 agggttattt ctagctatgc actacacctc cgacatttcc actgcattct catcagtagc 181 ccacatctgc cgtgatgtta attacggctg gctaatccga agcctacatg ctaatggagc 241 atctttcttc ttcatttgta tctacataca cattgcacga ggcctgtatt atggctcata 301 cctttataaa gagacctgaa atattggtgt agtcctactt cttttggtaa tggcaacagc 361 ctttgtaggc tatgtacttc cctgaggaca aatgtctttc tgaggtgcta cagtcattac 421 aaacctgata tcagcagtcc cctacatagg cgacaccctc gttcagtgaa tctgaggcgg 481 cttctcggta gataacgcaa ctcttacgcg attcttcgcc ttccacttcc ttctgccctt 541 tattattgcc ggcgcaacca tcctacacct gctcttttta cacgaaacag ggtcaaacaa 601 cccagccggg ttaaattccg atgcggacaa aatttctttc cacccatact tctcatataa 661 agacctcctt ggctttgtag taatactgtt agcacttaca tcattagcat tattttcccc 721 aaacttactg gaggacccag ataacttcac cccagcgaac ccattagtta ctcccccaca 781 cattcagcca gaatggtact ttttatttgc ctacgccatt cttcgatcaa ttccaaacaa 841 gctaggaggg gtacttgcac tattatttag cattctagta ctaatagttg tgccaattct 901 acacacttca aaacaacgag gactaacctt tcgtcctatg acccagtttc tcttctgaac 961 cttagtagca gatatactta tcttaacatg gatcggaggc atgcccgtag aacacccata 1021 tgtcattatc ggtcaagttg catcaaccct atactttgca cttttcctta tcctcgtgcc 1081 cctagcaggg tgagtagaaa ataaagcact gaaatgaact // LOCUS AB207016 664 bp DNA linear VRT 11-OCT-2007 DEFINITION Phoxinus oxycephalus mitochondrial DNA, D-loop control region, isolate: Yoshino R1. ACCESSION AB207016 VERSION AB207016.1 KEYWORDS . SOURCE mitochondrion Phoxinus oxycephalus (Chinese minnow) ORGANISM Rhynchocypris oxycephalus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pseudaspininae; Rhynchocypris. REFERENCE 1 (bases 1 to 664) AUTHORS Sasaki,T. and Naoto,H. TITLE Direct Submission JOURNAL Submitted (15-MAR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Takeshi Sasaki National Institute for Basic Biology, Division of Speciation Mechanism; 38 Nishigonaka, Myodaiji, Okazaki, Aichi 444-8585, Japan REFERENCE 2 AUTHORS Sasaki,T., Kartavtsev,Y.P., Chiba,S.N., Uematsu,T., Sviridov,V.V. and Hanzawa,N. TITLE Genetic divergence and phylogenetic independence of Far Eastern species in subfamily Leuciscinae (Pisces: Cyprinidae) inferred from mitochondrial DNA analyses JOURNAL Genes Genet. Syst. 82, 329-340 (2007) COMMENT FEATURES Location/Qualifiers source 1..664 /country="Japan: Kochi, Yoshino River" /db_xref="taxon:109666" /isolate="Yoshino R1" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Phoxinus oxycephalus" /sub_species="jouyi" D-loop <1..>664 /note="control region" gap 467..566 /estimated_length=unknown BASE COUNT 189 a 115 c 78 g 182 t ORIGIN 1 tgtgttgtgt tagtacatat atatgtatta tcaccattca tttatattaa cctaaaagca 61 agtactaacg tctaagacgt acataagcaa atcattaaaa ctcataaata atttatttta 121 acctgggaaa tagattattc ccctagatat ggcacacaaa cctttccttg aaatacacaa 181 ccaacatttc gagagacaat cttaatgtag taagagccca ccaaccttat tatgtaaggc 241 atattaccca tgatagaacc agggacacaa tatgtggggg ttgttaactg tgaactattc 301 cttgcatctg gttcctattt caggtacata cttttaaaac tccacctccg gtgaattata 361 cttgcatctg attaatggtg taattacata ctcctcgtta cccaacatgc cgggcgttca 421 cgtaaatgca taggggttct cttttttggt agcctttcaa ttacatnnnn nnnnnnnnnn 481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 541 nnnnnnnnnn nnnnnnnnnn nnnnnntatc aactcatcgg aaaacttacc caaattttag 601 cctaaaaatc tctactaagt aaatgacaaa tttctcaatg ctaaaaaatc caacatattt 661 tatt //