LOCUS AB198955 1120 bp DNA linear VRT 11-MAY-2023 DEFINITION Pseudaspius hakonensis mitochondrial cytb gene for cytochrome b, partial cds, isolate: Mamigasaki R1. ACCESSION AB198955 VERSION AB198955.1 KEYWORDS . SOURCE mitochondrion Pseudaspius hakonensis (big-scaled redfin) ORGANISM Pseudaspius hakonensis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pseudaspininae; Pseudaspius. REFERENCE 1 (bases 1 to 1120) AUTHORS Sasaki,T. and Naoto,H. TITLE Direct Submission JOURNAL Submitted (12-JAN-2005) to the DDBJ/EMBL/GenBank databases. Contact:Takeshi Sasaki National Institute for Basic Biology, Division of Speciation Mechanism; 38 Nishigonaka, Myodaiji-cho, Okazaki, Aichi 444-8585, Japan REFERENCE 2 AUTHORS Sasaki,T., Kartavtsev,Y.P., Chiba,S.N., Uematsu,T., Sviridov,V.V. and Hanzawa,N. TITLE Genetic divergence and phylogenetic independence of Far Eastern species in subfamily Leuciscinae (Pisces: Cyprinidae) inferred from mitochondrial DNA analyses JOURNAL Genes Genet. Syst. 82, 329-340 (2007) COMMENT FEATURES Location/Qualifiers source 1..1120 /country="Japan: Yamagata, Yamagata, Mamigasaki River" /db_xref="taxon:3004147" /isolate="Mamigasaki R1" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Pseudaspius hakonensis" /tissue_type="muscle" CDS <1..>1120 /codon_start=2 /gene="cytb" /product="cytochrome b" /protein_id="BAF81960.1" /transl_table=2 /translation="HPLMKIANHALVDLPTPSNISALWNFGSLLGLCLITQILTGLFL AMHYTSDISTAFSSVAHICRDVNYGWLIRSLHANGASFFFICIYMHIARGLYYGSYLY KETWNIGVVLLLLVMATAFVGYVLPWGQMSFWGATVITNLMSAVPYMGDTLVQWIWGG FSVDNATLTRFFAFHFLLPFIIAGATILHLLFLHETGSNNPAGLNSDADKISFHPYFS YKDLLGFVVMLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRS IPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPMTQFLFWTLVADMIILTWIGGM PVEHPYVIIGQIASTLYFALFLILVPLAGWVENKALKWA" BASE COUNT 303 a 314 c 172 g 331 t ORIGIN 1 ccacccgcta ataaaaatcg ctaatcatgc actagttgat ctccccacac catctaacat 61 ttcagccctc tgaaactttg gatccctcct aggattatgt ttaattaccc aaattctcac 121 cggattattc ttggccatac actacacctc tgatatctca accgcattct catcagtggc 181 ccacatctgc cgagatgtaa actatggctg actcatccga agcttacacg ccaacggagc 241 atcctttttc tttatctgta tttatataca tattgcccgc ggcctatatt atggatccta 301 cctctataaa gagacctgaa acatcggcgt agtcctgctc ctattagtta tagcaaccgc 361 ctttgtaggc tatgttctcc cgtgaggaca aatatctttc tgaggcgcca cagttattac 421 aaatctaata tcagcagtcc cctacatagg agacaccctt gttcaatgaa tctgaggggg 481 cttctcagta gacaacgcaa ctctcacacg attcttcgca ttccacttcc tcctgccgtt 541 tatcatcgcc ggcgcaacca tcctccacct actctttcta cacgaaacag ggtcaaacaa 601 tccggccggg ctaaactccg acgcagataa aatttctttc catccatact tctcttataa 661 agaccttctt ggttttgtag taatactact agctcttaca tcattagcat tattttctcc 721 aaacctacta ggtgacccag ataatttcac tccggcaaac ccactagtca ctcccccaca 781 catccagcca gaatgatatt tcctatttgc ctacgccatt cttcgatcta ttccaaacaa 841 actaggaggg gtccttgcac tattatttag catcttagta ctaatagttg tgccaattct 901 acacacctcg aaacaacgag gactaacctt tcgccctatg actcaatttt tattctgaac 961 tttagtagca gatataatta tcctaacatg aattgggggc atacccgtag aacaccccta 1021 tgttatcatt ggtcaaatcg cctcaacgct atattttgca ctcttcctta ttcttgtgcc 1081 cttggcggga tgagtagaaa ataaggcact gaaatgagct // LOCUS AB207000 660 bp DNA linear VRT 11-MAY-2023 DEFINITION Pseudaspius hakonensis mitochondrial DNA, D-loop control region, isolate: Mamigasaki R1. ACCESSION AB207000 VERSION AB207000.1 KEYWORDS . SOURCE mitochondrion Pseudaspius hakonensis (big-scaled redfin) ORGANISM Pseudaspius hakonensis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pseudaspininae; Pseudaspius. REFERENCE 1 (bases 1 to 660) AUTHORS Sasaki,T. and Naoto,H. TITLE Direct Submission JOURNAL Submitted (15-MAR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Takeshi Sasaki National Institute for Basic Biology, Division of Speciation Mechanism; 38 Nishigonaka, Myodaiji, Okazaki, Aichi 444-8585, Japan REFERENCE 2 AUTHORS Sasaki,T., Kartavtsev,Y.P., Chiba,S.N., Uematsu,T., Sviridov,V.V. and Hanzawa,N. TITLE Genetic divergence and phylogenetic independence of Far Eastern species in subfamily Leuciscinae (Pisces: Cyprinidae) inferred from mitochondrial DNA analyses JOURNAL Genes Genet. Syst. 82, 329-340 (2007) COMMENT FEATURES Location/Qualifiers source 1..660 /country="Japan: Yamagata, Yamagata, Mamigasaki River" /db_xref="taxon:3004147" /isolate="Mamigasaki R1" /mol_type="genomic DNA" /organelle="mitochondrion" /organism="Pseudaspius hakonensis" /tissue_type="muscle" D-loop <1..>660 /note="control region" gap 464..563 /estimated_length=unknown BASE COUNT 180 a 115 c 83 g 182 t ORIGIN 1 tgtgttgtgt tagtgcatat atatgtatta tcaccattaa tttattttaa cctaaaagca 61 agtactaacg ttcatgacgt acataaacca aaccgttaaa atacaaaaat aatttatttt 121 aacctgggaa atagactatt cccctagata tggcacgcac atgtttcctc gaaatactca 181 actaggattt cattagacaa tctcaatgta gtaagaaccg accaacctta ttatgtaagg 241 catattatcc atgatagaac cagggacaca caacagtagg atggcgcaca gtgaactatt 301 ccttgcatct ggcttcaatc tcaggttcaa gttatggagt tccaccctga tttattgcct 361 tgcatccggt taccagtgta attacatact cctcgttacc caacatgccg ggcgttcatt 421 taaatgcata gggttctttt ttttggtttc ctttcaatcg catnnnnnnn nnnnnnnnnn 481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 541 nnnnnnnnnn nnnnnnnnnn nnntatcaat tcattggaaa aatgtcccaa attttagcct 601 aaaaatctct actaatttaa tgacaaattt ctcaatgcta aaaaatccaa tgtatttagc //