LOCUS       AB108959                1144 bp    DNA     linear   VRT 04-JUN-2010
DEFINITION  Tanakia limbata mitochondrial cytb gene for cytochrome b, partial
            sequence, isolate: Koya River 2.
ACCESSION   AB108959
VERSION     AB108959.1
KEYWORDS    .
SOURCE      mitochondrion Tanakia limbata (oily bitterling)
  ORGANISM  Tanakia limbata
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Acheilognathidae; Tanakia.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Hashiguchi,Y. and Tachida,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Hidenori Tachida
            Kyushu University, Department of Biology, Faculty of Sciences;
            6-10-1 Hakozaki Higashi-ku, Fukuoka, Fukuoka 812-8581, Japan
            URL    :http://cellbio.biology.kyushu-u.ac.jp/tachida/
REFERENCE   2  
  AUTHORS   Hashiguchi,Y., Kado,T., Kimura,S. and Tachida,H.
  TITLE     Comparative phylogeography of two bitterlings, Tanakia lanceolata
            and T. limbata (Teleostei, Cyprinidae), in Kyushu and adjacent
            districts of western Japan, based on mitochondrial DNA analysis
  JOURNAL   Zool. Sci. 23, 309-322 (2006)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..1144
                     /country="Japan:Yamaguchi, Koya River"
                     /db_xref="taxon:80806"
                     /dev_stage="adult"
                     /isolate="Koya River 2"
                     /mol_type="genomic DNA"
                     /organelle="mitochondrion"
                     /organism="Tanakia limbata"
                     /tissue_type="muscle"
     CDS             <1..1115
                     /codon_start=2
                     /gene="cytb"
                     /note="TAA stop codon is completed by the addition of 3'
                     A residues to the mRNA"
                     /product="cytochrome b"
                     /protein_id="BAD13644.2"
                     /transl_except=(pos:1115,aa:TERM)
                     /transl_table=2
                     /translation="LIKIANDALVDLPTPSNISVWWNFGSLLGLCLISQILTGLFLAM
                     HYTSDISTAFSSVNHICRDVNYGWLIRSLHANGASFFFICIYMHIARGLYYGSYLYKE
                     TWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYMGDALVQWIWGGFS
                     VDNATLTRFFAFHFLLPFVVAAATILHLLFLHETGSNNPAGLNSDADKISFHPYFSYK
                     DLLGFVLMLMALTSLALFSPNLLGDSENFIPANPLVTPPHIKPEWYFLFAYAILRSIP
                     NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPVTQFLFWTLIADMVILTWIGGMPV
                     EHPYIIIGQIASVLYFALFLILAPLAGWMENKALKWA"
     tRNA            1116..>1144
                     /product="tRNA Thr"
BASE COUNT          282 a          314 c          197 g          351 t
ORIGIN      
        1 actcattaaa atcgctaacg atgcactagt ggacctacca acaccctcca acatctcagt
       61 ctgatggaat tttgggtctc ttttaggact gtgtttaatt tcccaaatcc tgacaggcct
      121 ctttctagca atacactaca cctccgacat ttcaaccgca ttttcttcag ttaaccacat
      181 ctgccgagat gttaattacg gctgattaat ccgaagttta cacgccaacg gcgcatcatt
      241 tttctttatt tgcatttaca tgcacatcgc ccgcggtcta tactacggat cttatctgta
      301 taaggagacc tgaaacattg gtgttgttct gcttctcctt gttataataa ccgcttttgt
      361 gggctatgtt ttgccctgag gccaaatatc attctgaggg gccacagtga ttaccaacct
      421 gctttcagca gtcccttaca taggagacgc cctggttcaa tgaatctgag ggggattttc
      481 ggttgataac gcaacactta ctcgattctt cgccttccac ttccttcttc catttgtcgt
      541 cgccgcggcg accatcctcc accttctatt tttacatgag acaggatcga acaaccccgc
      601 cggactaaat tctgacgcgg acaaaatctc cttccacccc tatttttctt ataaagatct
      661 attagggttt gttcttatac ttatagcctt aacatcccta gcactgtttt cacccaacct
      721 actaggtgac tcagaaaatt ttattcccgc caaccctctt gttaccccgc cacacattaa
      781 gccagaatga tattttttat ttgcctacgc catcttgcgg tccatcccaa ataaactagg
      841 gggtgtgctt gcgttattgt tttccatcct cgtacttatg gtagtcccaa ttctacatac
      901 ttcaaaacaa cgtggactaa cctttcgccc cgtcacccaa ttcctattct gaaccctaat
      961 cgcggacata gttatcttaa catgaatcgg aggtataccc gtagagcacc cgtacatcat
     1021 tattggacaa attgcatcgg tgctatactt cgcgctcttc ctaatcctcg cgccgctagc
     1081 cgggtgaatg gaaaataaag cactgaaatg agcctgccct agtagcttag tcttctaaag
     1141 catc
//