LOCUS AK312397 2714 bp mRNA linear HTC 24-MAY-2008 DEFINITION Homo sapiens cDNA, FLJ92729, highly similar to Homo sapiens hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) (HIF1A), mRNA. ACCESSION AK312397 VERSION AK312397.1 KEYWORDS HTC; HTC_FLI; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2714) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K., Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T., Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S., Goshima,N., Nomura,N. and Isogai,T. TITLE NEDO functional analysis of protein and research application project JOURNAL Unpublished (2008) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC and Biological Information Research Center (BIRC), AIST; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2714 /clone="BRAMY3018425" /clone_lib="BRAMY3" /db_xref="H-InvDB:HIT000431263" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="amygdala" CDS 234..2714 /note="highly similar to Homo sapiens hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) (HIF1A), mRNA" /protein_id="BAG35314.1" /translation="MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQL PLPHNVSSHLDKASVMRLTISYLRVRKLLDAGDLDIEDDMKAQMNCFYLKALDGFVMV LTDDGDMIYISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKE QNTQRSFFLRMKCTLTSRGRTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMT CLVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIY EYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQC IVCVNYVVSGIIQHDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLKK EPDALTLLAPAAGDTIISLDFGSNDTETDDQQLEEVLLYNDVMLPSPNEKLQNINLAM SPLPTAETPKPLRSSADPALNQEVALKLEPNPESLELSFTMPQIQDQTPSPSDGSTRQ SSPEPNSPSEYCFYVDSDMVNEFKLELVEKLFAEDTEAKNPFSTQDTDLDLEMLAPYI PMDDDFQLRSFDQLSPLESSSASPESASPQSTVTVFQQTQIQEPTANATTTTATTDEL KTVTKDRMEDIKILIASPSPTHIHKETTSATSSPYRDTQSRTASPNRAGKGVIEQTEK SHPRSPNVLSVALSQRTTVPEEELNPKILALQNAQRKRKMEHDGSLFQAVGIGTLLQQ PDDHAATTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACRLLGQSMDESGLPQLTSY DCEVNAPIQGSRNLLQGEELLRALDQVN" BASE COUNT 859 a 597 c 576 g 682 t ORIGIN 1 cagtgtgtcg ggctgggccc tgacaagcca cctgaggaga ggctcggagc cgggcccgga 61 ccccggcgat tgccgcccgc ttctctctag tctcacgagg ggtttcccgc ctcgcacccc 121 cacctctgga cttgcctttc cttctcttct ccgcgtgtgg agggagccag cgcttaggcc 181 ggagcgagcc tgggggccgc ccgccgtgaa gacatcgcgg ggaccgattc accatggagg 241 gcgccggcgg cgcgaacgac aagaaaaaga taagttctga acgtcgaaaa gaaaagtctc 301 gagatgcagc cagatctcgg cgaagtaaag aatctgaagt tttttatgag cttgctcatc 361 agttgccact tccacataat gtgagttcgc atcttgataa ggcctctgtg atgaggctta 421 ccatcagcta tttgcgtgtg aggaaacttc tggatgctgg tgatttggat attgaagatg 481 acatgaaagc acagatgaat tgcttttatt tgaaagcctt ggatggtttt gttatggtcc 541 tcacagatga tggtgacatg atttacattt ctgataatgt gaacaaatac atgggattaa 601 ctcagtttga actaactgga cacagtgtgt ttgattttac tcatccatgt gaccatgagg 661 aaatgagaga aatgcttaca cacagaaatg gccttgtgaa aaagggtaaa gaacaaaaca 721 cacagcgaag cttttttctc agaatgaagt gtaccctaac tagccgagga agaactatga 781 acataaagtc tgcaacatgg aaggtattgc actgcacagg ccacattcac gtatatgata 841 ccaacagtaa ccaacctcag tgtgggtata agaaaccacc tatgacctgc ttggtgctga 901 tttgtgaacc cattcctcac ccatcaaata ttgaaattcc tttagatagc aagactttcc 961 tcagtcgaca cagcctggat atgaaatttt cttattgtga tgaaagaatt accgaattga 1021 tgggatatga gccagaagaa cttttaggcc gctcaattta tgaatattat catgctttgg 1081 actctgatca tctgaccaaa actcatcatg atatgtttac taaaggacaa gtcaccacag 1141 gacagtacag gatgcttgcc aaaagaggtg gatatgtctg ggttgaaact caagcaactg 1201 tcatatataa caccaagaat tctcaaccac agtgcattgt atgtgtgaat tacgttgtga 1261 gtggtattat tcagcacgac ttgattttct cccttcaaca aacagaatgt gtccttaaac 1321 cggttgaatc ttcagatatg aaaatgactc agctattcac caaagttgaa tcagaagata 1381 caagtagcct ctttgacaaa cttaagaagg aacctgatgc tttaactttg ctggccccag 1441 ccgctggaga cacaatcata tctttagatt ttggcagcaa cgacacagaa actgatgacc 1501 agcaacttga ggaagtacta ttatataatg atgtaatgct cccctcaccc aacgaaaaat 1561 tacagaatat aaatttggca atgtctccat tacccaccgc tgaaacgcca aagccacttc 1621 gaagtagtgc tgaccctgca ctcaatcaag aagttgcatt aaaattagaa ccaaatccag 1681 agtcactgga actttctttt accatgcccc agattcagga tcagacacct agtccttccg 1741 atggaagcac tagacaaagt tcacctgagc ctaatagtcc cagtgaatat tgtttttatg 1801 tggatagtga tatggtcaat gaattcaagt tggaattggt agaaaaactt tttgctgaag 1861 acacagaagc aaagaaccca ttttctactc aggacacaga tttagacttg gagatgttag 1921 ctccctatat cccaatggat gatgacttcc agttacgttc cttcgatcag ttgtcaccat 1981 tagaaagcag ttccgcaagc cctgaaagcg caagtcctca aagcacagtt acagtattcc 2041 agcagactca aatacaagaa cctactgcta atgccaccac taccactgcc accactgatg 2101 aattaaaaac agtgacaaaa gaccgtatgg aagacattaa aatattgatt gcatctccat 2161 ctcctaccca catacataaa gaaactacta gtgccacatc atcaccatat agagatactc 2221 aaagtcggac agcctcacca aacagagcag gaaaaggagt catagaacag acagaaaaat 2281 ctcatccaag aagccctaac gtgttatctg tcgctttgag tcaaagaact acagttcctg 2341 aggaagaact aaatccaaag atactagctt tgcagaatgc tcagagaaag cgaaaaatgg 2401 aacatgatgg ttcacttttt caagcagtag gaattggaac attattacag cagccagacg 2461 atcatgcagc tactacatca ctttcttgga aacgtgtaaa aggatgcaaa tctagtgaac 2521 agaatggaat ggagcaaaag acaattattt taataccctc tgatttagca tgtagactgc 2581 tggggcaatc aatggatgaa agtggattac cacagctgac cagttatgat tgtgaagtta 2641 atgctcctat acaaggcagc agaaacctac tgcagggtga agaattactc agagctttgg 2701 atcaagttaa ctga //