LOCUS AK304182 4486 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61543 complete cds, highly similar to Desmoplakin. ACCESSION AK304182 VERSION AK304182.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4486) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4486 /clone="TRACH3014955" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000498806" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 245..4297 /codon_start=1 /note="highly similar to Desmoplakin" /protein_id="BAG65062.1" /transl_table=1 /translation="MSCNGGSHPRINTLGRMIRAESGPDLRYEVTSGGGGTSRMYYSR RGVITDQNSDGYCQTGTMSRHQNQNTIQELLQNCSDCLMRAELIVQPELKYGDGIQLT RSRELDECFAQANDQMEILDSLIREMRQMGQPCDAYQKRLLQLQEQMRALYKAISVPR VRRASSKGGGGYTCQSGSGWDEFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHI NSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLRQLQNII QATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESD QLVLNQHPASDKIEAYMDTPQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYL KGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKP RNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSV GLIIPPPNPLAVDLSCKIEQYYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIA KLKTMRQEDYMKTIADLELHYQEFIRNSQGSEMFGDDDKRKIQSQFTDAQKHYQTLVI QLPGYPQHQTVTTTEITHHGTCQDVNHNKVIETNRENDKQETWMLMELQKIRRQIEHC EGRMTLKNLPLADQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGSEKYC YLQNEVFGLFQKLENINGVTDGYLNSLCTVRALLQAILQTEDMLKVYEARLTEEETVC LDLDKVEAYRCGLKKIKNDLNLKKSLLATMKTELQKAQQIHSQTSQQYPLYDLDLGKF GEKVTQLTDRWQRIDKQIDFRLWDLEKQIKQLRNYRDNYQAFCKWLYDAKRRQDSLES MKFGDSNTVMRFLNEQKNLHSEISGKRDKSEEVQKIAELCANSIKDYELQLASYTSGL ETLLNIPIKRTMIQSPSGVILQEAADVHARYIELLTRSGDYYRFLSEMLKSLEDLKLK NTKIEVLEEELRLARDANSENCNKNKFLDQNLQKYQAECSQFKAKLASLEELKRQAEL DGKSAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKSVEDRFDQQKNDYDQLQKAR QCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGTRKMSAAEAVKEKWLPYEAGQR FLEFQYLTGGLVDPEVHGRISTEEAIRKGFIDGRAAQRLQDTSSYAKILTCPKTKLKI SYKDAINRSMVEDITGLRLLEAASVSSKGLPSPYNMSSAPGSRSGSRSGSRSGSRSGS RSGSRRGSFDATGNSSYSYSYSFSSSSIGH" BASE COUNT 1307 a 1099 c 1149 g 931 t ORIGIN 1 ctctgcgccc ttgccgccct ccgagccaca gctttcctcc cgctcctgcc cccggcccgt 61 cgccgtctcc gcgctcgcag cggcctcggg agggcccagg tagcgagcag cgacctcgcg 121 agccttccgc actcccgccc ggttccccgg ccgtccgcct acccttggcc ccctccgctt 181 tctccgcgcc ggcccgcctc gcttatgcct cggcgctgag ccgctctccc gattgcccgc 241 cgacatgagc tgcaacggag gctcccaccc gcggatcaac actctgggcc gcatgatccg 301 cgccgagtct ggcccggacc tgcgctacga ggtgaccagc ggcggcgggg gcaccagcag 361 gatgtactac tctcggcgcg gcgtgatcac cgaccagaac tcggacggct actgtcaaac 421 cggcacgatg tccaggcacc agaaccagaa caccatccag gagctgctgc agaactgctc 481 cgactgcttg atgcgagcag agctcatcgt gcagcctgaa ttgaagtatg gagatggaat 541 acaactgact cggagtcgag aattggatga gtgttttgcc caggccaatg accaaatgga 601 aatcctcgac agcttgatca gagagatgcg gcagatgggc cagccctgtg atgcttacca 661 gaaaaggctt cttcagctcc aagagcaaat gcgagccctt tataaagcca tcagtgtccc 721 tcgagtccgc agggccagct ccaagggtgg tggaggctac acttgtcaga gtggctctgg 781 ctgggatgag ttcaccaaac atgtcaccag tgaatgtttg gggtggatga ggcagcaaag 841 ggcggagatg gacatggtgg cctggggtgt ggacctggcc tcagtggagc agcacattaa 901 cagccaccgg ggcatccaca actccatcgg cgactatcgc tggcagctgg acaaaatcaa 961 agccgacctg cgcgagaaat ctgcgatcta ccagttggag gaggagtatg aaaacctgct 1021 gaaagcgtcc tttgagagga tggatcacct gcgacagctg cagaacatca ttcaggccac 1081 gtccagggag atcatgtgga tcaatgactg cgaggaggag gagctgctgt acgactggag 1141 cgacaagaac accaacatcg ctcagaaaca ggaggccttc tccatacgca tgagtcaact 1201 ggaagttaaa gaaaaagagc tcaataagct gaaacaagaa agtgaccaac ttgtcctcaa 1261 tcagcatcca gcttcagaca aaattgaggc ctatatggac actccgcaga cgcagtggag 1321 ttggattctt cagatcacca agtgcattga tgttcatctg aaagaaaatg ctgcctactt 1381 tcagtttttt gaagaggcgc agtctactga agcatacctg aaggggctcc aggactccat 1441 caggaagaag tacccctgcg acaagaacat gcccctgcag cacctgctgg aacagatcaa 1501 ggagctggag aaagaacgag agaaaatcct tgaatacaag cgtcaggtgc agaacttggt 1561 aaacaagtct aagaagattg tacagctgaa gcctcgtaac ccagactaca gaagcaataa 1621 acccattatt ctcagagctc tctgtgacta caaacaagat cagaaaatcg tgcataaggg 1681 ggatgagtgt atcctgaagg acaacaacga gcgcagcaag tggtacgtga cgggcccggg 1741 aggcgttgac atgcttgttc cctctgtggg gctgatcatc cctcctccga acccactggc 1801 cgtggacctc tcttgcaaga ttgagcagta ctacgaagcc atcttggctc tgtggaacca 1861 gctctacatc aacatgaaga gcctggtgtc ctggcactac tgcatgattg acatagagaa 1921 gatcagggcc atgacaatcg ccaagctgaa aacaatgcgg caggaagatt acatgaagac 1981 gatagccgac cttgagttac attaccaaga gttcatcaga aatagccaag gctcagagat 2041 gtttggagat gatgacaagc ggaaaataca gtctcagttc accgatgccc agaagcatta 2101 ccagaccctg gtcattcagc tccctggcta tccccagcac cagacagtga ccacaactga 2161 aatcactcat catggaacct gccaagatgt caaccataat aaagtaattg aaaccaacag 2221 agaaaatgac aagcaagaaa catggatgct gatggagctg cagaagattc gcaggcagat 2281 agagcactgc gagggcagga tgactctcaa aaacctccct ctagcagacc aggggtcttc 2341 tcaccacatc acagtgaaaa ttaacgagct taagagtgtg cagaatgatt cacaagcaat 2401 tgctgaggtt ctcaaccagc ttaaagatat gcttgccaac ttcagaggtt ctgaaaagta 2461 ctgctattta cagaatgaag tatttggact atttcagaaa ctggaaaata tcaatggtgt 2521 tacagatggc tacttaaata gcttatgcac agtaagggca ctgctccagg ctattctcca 2581 aacagaagac atgttaaagg tttatgaagc caggctcact gaggaggaaa ctgtctgcct 2641 ggacctggat aaagtggaag cttaccgctg tggactgaag aaaataaaaa atgacttgaa 2701 cttgaagaag tcgttgttgg ccactatgaa gacagaacta cagaaagccc agcagatcca 2761 ctctcagact tcacagcagt atccacttta tgatctggac ttgggcaagt tcggtgaaaa 2821 agtcacacag ctgacagacc gctggcaaag gatagataaa cagatcgact ttagattatg 2881 ggacctggag aaacaaatca agcaattgag gaattatcgt gataactatc aggctttctg 2941 caagtggctc tatgatgcta aacgccgcca ggattcctta gaatccatga aatttggaga 3001 ttccaacaca gtcatgcggt ttttgaatga gcagaagaac ttgcacagtg aaatatctgg 3061 caaacgagac aaatcagagg aagtacaaaa aattgctgaa ctttgcgcca attcaattaa 3121 ggattatgag ctccagctgg cctcatacac ctcaggactg gaaactctgc tgaacatacc 3181 tatcaagagg accatgattc agtccccttc tggggtgatt ctgcaagagg ctgcagatgt 3241 tcatgctcgg tacattgaac tacttacaag atctggagac tattacaggt tcttaagtga 3301 gatgctgaag agtttggaag atctgaagct gaaaaatacc aagatcgaag ttttggaaga 3361 ggagctcaga ctggcccgag atgccaactc ggaaaactgt aataagaaca aattcctgga 3421 tcagaacctg cagaaatacc aggcagagtg ttcccagttc aaagcgaagc ttgcgagcct 3481 ggaggagctg aagagacagg ctgagctgga tgggaagtcg gctaagcaaa atctagacaa 3541 gtgctacggc caaataaaag aactcaatga gaagattacc cgactgactt atgagattga 3601 agatgaaaag agaagaagaa aatctgtgga agacagattt gaccaacaga agaatgacta 3661 tgaccaactg cagaaagcaa ggcaatgtga aaaggagaac cttggttggc agaaattaga 3721 gtctgagaaa gccatcaagg agaaggagta cgagattgaa aggttgaggg ttctactgca 3781 ggaagaaggc acccggaaga tgtcagcagc agaggcagtg aaagaaaaat ggctcccgta 3841 tgaggctggc cagcgcttcc tggagttcca gtacctcacg ggaggtcttg ttgacccgga 3901 agtgcatggg aggataagca ccgaagaagc catccggaag gggttcatag atggccgcgc 3961 cgcacagagg ctgcaagaca ccagcagcta tgccaaaatc ctgacctgcc ccaaaaccaa 4021 attaaaaata tcctataagg atgccataaa tcgctccatg gtagaagata tcactgggct 4081 gcgccttctg gaagccgcct ccgtgtcgtc caagggctta cccagccctt acaacatgtc 4141 ttcggctccg ggctcccgct ccggctcccg ctcgggatct cgctccggat ctcgctccgg 4201 gtcccgcagt gggtcccgga gaggaagctt tgacgccaca gggaattctt cctactctta 4261 ttcctactca tttagcagta gttctattgg gcactagtag tcagttggga gtggttgcta 4321 taccttgact tcatttatat gaatttccac tttattaaat aatagaaaag aaaatcccgg 4381 tgcttgcagt agagtgatag gacattctat gcttacagaa aatatagcca tgattgaaat 4441 caaatagtaa aggctgttct ggctttttat cttcttagct catctt //