LOCUS AK304114 3458 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ54410 partial cds, highly similar to Ubiquitously transcribed X chromosometetratricopeptide repeat protein. ACCESSION AK304114 VERSION AK304114.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3458) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3458 /clone="TRACH3009538" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000498738" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 414..>3458 /codon_start=1 /note="highly similar to Ubiquitously transcribed X chromosometetratricopeptide repeat protein" /protein_id="BAG65015.1" /transl_table=1 /translation="MKSCGVSLATAAAAAAAFGDEEKKMAAGKASGESEEASPSLTAE EREALGGLDSRLFGFVRFHEDGARTKALLGKAVRCYESLILKAEGKVESDFFCQLGHF NLLLEDYPKALSAYQRYYSLQSDYWKNAAFLYGLGLVYFHYNAFQWAIKAFQEVLYVD PSFCRAKEIHLRLGLMFKVNTDYESSLKHFQLALVDCNPCTLSNAEIQFHIAHLYETQ RKYHSAKEAYEQLLQTENLSAQVKATVLQQLGWMHHTVDLLGDKATKESYAIQYLQKS LEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQP MDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKSCSNTSALAA RIKYLQAQLCNLPQGSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNTSDNWS GGHAVSHPPVQQQAHSWCLTPQKLQMRPTGVAQVRSTGIPNGPTADSSLPTNSVSGQQ PQLALTRVPSVSQPGVRPACPGQPLANGPFSAGHVPCSTSRTLGSTDTILIGNNHITG SGSNGNVPYLQRNALTLPHNRTNLTSSAEEPWKNQLSNSTQGLHKGQSSHSAGPNGER PLSSTGPSQHLQAAGSGIQNQNGHPTLPSNSVTQGAALNHLSSHTATSGGQQGITLTK ESKPSGNILTVPETSRHTGETPNSTASVEGLPNHVHQMTADAVCSPSHGDSKSPGLLS SDNPQLSALLMGKANNNVGTGTCDKVNNIHPAVHTKTDNSVASSPSSAISTATPSPKS TEQTTTNSVTSLNSPHSGLHTINGEGMEESQSPMKTDLLLVNHKPSPQIIPSMSVSIY PSSAEVLKACRNLGKNGLSNSSILLDKCPPPRPPSSPYPPLPKDKLNPPTPSIYLENK RDAFFPPLHQFCTNPNNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHMVEVRTQLLQ PADENWDPTGTKKIWHCESNRSHTTIAKYAQYQASSFQESLRE" BASE COUNT 934 a 900 c 795 g 829 t ORIGIN 1 gtgttgttgc catggtaatc ctgctcagta cgagaggaac cgcaggttca caacaacttt 61 gtgctggtgc cggggaagtt tgtgtctcca acgaatcccc tcagtgctcc ccagccccgc 121 gcgctccggc cgttcccgcc gtccccgcct gtggctgccc cctgcccaac cccgcgatgt 181 gaccctacag ccgaaagccg ccgctgccga cccgggggct ccgcagcccc tgccgccgcc 241 gccgccgcct tcaccgccgc cgcgttggga tttttcgtcg ccgccgcccg cggcggagga 301 ggaggcggcg ataaagttgg tgtgctggtc ccgcgcgcag attgggggcg tcactgcggg 361 ccccggtccg agggggggtg tcggcgttgg agttgtgaat tcgctgcgtt tccatgaaat 421 cctgcggagt gtcgctcgct accgccgccg ctgccgccgc cgctttcggt gatgaggaaa 481 agaaaatggc ggcgggaaaa gcgagcggcg agagcgagga ggcgtccccc agcctgacag 541 ccgaggagag ggaggcgctc ggcggactgg acagccgcct ctttgggttc gtgagatttc 601 atgaagatgg cgccaggacg aaggccctac tgggcaaggc tgttcgctgc tatgaatctc 661 taatcttaaa agctgaagga aaagtggagt ctgatttctt ttgtcaatta ggtcacttca 721 acctcttatt ggaagattat ccaaaagcat tatctgcata ccagaggtac tacagtttac 781 agtctgacta ctggaagaat gctgcctttt tatatggtct tggtttggtc tacttccatt 841 ataatgcatt tcagtgggca attaaagcat ttcaggaggt gctttatgtt gatcccagct 901 tttgtcgagc caaggaaatt catttacgac ttgggcttat gttcaaagtg aacacagact 961 atgagtctag tttaaagcat tttcagttag ctttggttga ctgtaatccc tgcactttgt 1021 ccaatgctga aattcaattt cacattgccc acttatatga aacccagagg aaatatcatt 1081 ctgcaaaaga agcttatgaa caacttttgc agacagagaa tctttctgca caagtaaaag 1141 caactgtctt acaacagtta ggttggatgc atcacactgt agatctcctg ggagataaag 1201 ccaccaagga aagctatgct attcagtatc tccaaaagtc cttggaagca gatcctaatt 1261 ctggccagtc ctggtatttc ctcggaaggt gctattcaag tattgggaaa gttcaggatg 1321 cctttatatc ttacaggcag tctattgata aatcagaagc aagtgcagat acatggtgtt 1381 caataggtgt gctatatcag cagcaaaatc agcccatgga tgctttacag gcctatattt 1441 gtgctgtaca attggaccat ggccatgctg cagcctggat ggacctaggc actctctatg 1501 aatcctgcaa ccagcctcag gatgccatta aatgctactt aaatgcaact agaagcaaaa 1561 gttgtagtaa tacctctgca cttgcagcac gaattaagta tttacaggct cagttgtgta 1621 accttccaca aggtagtcta cagaataaaa ctaaattact tcctagtatt gaggaggcgt 1681 ggagcctacc aattcccgca gagcttacct ccaggcaggg tgccatgaac acagcacagc 1741 agaatacttc tgacaattgg agtggtggac atgctgtgtc acatcctcca gtacagcaac 1801 aagctcattc atggtgtttg acaccacaga aattacagat gagaccaaca ggagttgcac 1861 aggtacgatc tactggaatt cctaatgggc caacagctga ctcatcactg cctacaaact 1921 cagtctctgg ccagcagcca cagcttgctc tgaccagagt gcctagcgtc tctcagcctg 1981 gagtccgtcc tgcctgccct gggcagcctt tggccaatgg acccttttct gcaggccatg 2041 ttccctgtag cacatcaaga acgctgggaa gtacagacac tattttgata ggcaataatc 2101 atataacagg aagtggaagt aatggaaacg tgccttacct gcagcgaaac gcactcactc 2161 tacctcataa ccgcacaaac ctgaccagca gcgcagagga gccgtggaaa aaccaactat 2221 ctaactccac tcaggggctt cacaaaggtc agagttcaca ttcggcaggt cctaatggtg 2281 aacgacctct ctcttccact gggccttccc agcatctcca ggcagctggc tctggtattc 2341 agaatcagaa cggacatccc accctgccta gcaattcagt aacacagggg gctgctctca 2401 atcacctctc ctctcacact gctacctcag gtggacaaca aggcattacc ttaaccaaag 2461 agagcaagcc ttcaggaaac atattgacgg tgcctgaaac aagcaggcac actggagaga 2521 cacctaacag cactgccagt gtcgagggac ttcctaatca tgtccatcag atgacggcag 2581 atgctgtttg cagtcctagc catggagatt ctaagtcacc aggtttacta agttcagaca 2641 atcctcagct ctctgccttg ttgatgggaa aagccaataa caatgtgggt actggaacct 2701 gtgacaaagt caataacatc cacccagctg ttcatacaaa gactgataac tctgttgcct 2761 cttcaccatc ttcagccatt tcaacagcaa caccttctcc aaaatccact gagcagacaa 2821 ccacaaacag tgttaccagc cttaacagcc ctcacagtgg gctacacaca attaatggag 2881 aagggatgga agaatctcag agccccatga aaacagatct gcttctggtt aaccacaaac 2941 ctagtccaca gatcatacca tcaatgtctg tgtccatata ccccagctca gcagaagttc 3001 tgaaggcatg caggaatcta ggtaaaaatg gcttatctaa cagtagcatt ttgttggata 3061 aatgtccacc tccaagacca ccatcttcac cataccctcc cttgccaaag gacaagttga 3121 atccacctac acctagtatt tacttggaaa ataaacgtga tgctttcttt cctccattac 3181 atcaattttg tacaaatccg aacaaccctg ttacagtaat acgtggcctt gctggagctc 3241 ttaagttaga cctgggactt ttctctacta aaactttggt ggaagctaac aatgaacata 3301 tggtagaagt gaggacacag ttgttgcagc cagcagatga aaactgggat cccactggaa 3361 caaagaaaat ctggcattgt gaaagtaata gatctcatac tacaattgct aaatatgcac 3421 agtaccaggc ctcctcattc caggaatcat tgagagaa //