LOCUS AK299906 5119 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ58078 complete cds, highly similar to Tyrosine-protein phosphatase non-receptortype 23 (EC 3.1.3.48). ACCESSION AK299906 VERSION AK299906.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5119) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..5119 /clone="OCBBF3024363" /clone_lib="OCBBF3" /db_xref="H-InvDB:HIT000494530" /db_xref="taxon:9606" /dev_stage="fetal" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 337..4869 /codon_start=1 /note="highly similar to Tyrosine-protein phosphatase non-receptortype 23 (EC 3.1.3.48)" /protein_id="BAG61747.1" /transl_table=1 /translation="MLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREHFPQAYSVDMS RQILTLNVNLMLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEACRALENPDTAS LLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEAIKL AKGQPDTVQDALRFTMDVIGGKYNSAKKDNDFIYHEAVPALDTLQPVKGAPLVKPLPV NPTDPAVTGPDIFAKLVPMAAHEASSLYSEEKAKLLREMMAKIEDKNEVLDQFMDSMQ LDPETVDNLDAYSHIPPQLMEKCAALSVRPDTVRNLVQSMQVLSGVFTDVEASLKDIR DLLEEDELLEQKFQEAVGQAGAISITSKAELAEVRREWAKYMEVHEKASFTNSELHRA MNLHVGNLRLLSGPLDQVRAALPTPALSPEDKAVLQNLKRILAKVQEMRDQRVSLEQQ LRELIQKDDITASLVTTDHSEMKKLFEEQLKKYDQLKVYLEQNLAAQDRVLCALTEAN VQYAAVRRVLSDLDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADLESKVAALLER TQSTCQAREAARQQLLDRELKKKPPPRPTAPKPLLPRREESEAVEAGDPPEELRSLPP DMVAGPRLPDTFLGSATPLHFPPSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAP GPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSSPYVGVGPAPPVAGLPSAPPP QFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCFPVPPPQPLPTPYTY PAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPH LFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPG PPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVP PRPPAAEPPPCLRRGAAAADLLSSSPESQHGGTQSPGGGQPLLQPTKVDAAEGRRPQA LRLIERDPYEHPERLRQLQQELEAFRGQLGDVGALDTVWRELQDAQEHDARGRSIAIA RCYSLKNRHQDVMPYDSNRVVLRSGKDDYINASCVEGLSPYCPPLVATQAPLPGTAAD FWLMVHEQKVSVIVMLVSEAEMEKQKVARYFPTERGQPMVHGALSLALSSVRSTETHV ERVLSLQFRDQSLKRSLVHLHFPTWPELGLPDSPSNLLRFIQEVHAHYLHQRPLHTPI IVHCSSGVGRTGAFALLYAAVQEVEAGNGIPELPQLVRRMRQQRKHMLQEKLHLRFCY EAVVRHVEQVLQRHGVPPPCKPLASASISQKNHLPQDSQDLVLGGDVPISSIQATIAK LSIRPPGGLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEP PVPEAPSSGPPSSSLELLASLTPEAFSLDSSLRGKQRMSKHNFLQAHNGQGLRATRPS DDPLSLLDPLWTLNKT" BASE COUNT 1025 a 1765 c 1414 g 915 t ORIGIN 1 acgaaggggc ggggctgggc tcgtggctga gccagcagct gcagcagcta cgggagtggc 61 cgggtggccg gcgggtgcca gccgccatgg aggccgtgcc ccgcatgccc atgatctggc 121 tggacctgaa ggaggccggt gactttcact tccagccagc tgtgaagaag tttgtcctga 181 agaattatgg agagaaccca gaagcctaca atgaagaact gaagaagctg gagttgctca 241 gacaggacag agatcttctc aggcaagtct gtggcccatg aggacatcaa gtacgagcag 301 gcctgtattc tctacaacct tggagcgctg cactccatgc tgggggccat ggacaagcgg 361 gtgtctgagg agggcatgaa ggtctcctgt acccatttcc agtgcgcagc cggcgccttc 421 gcctacctac gggagcactt ccctcaagcc tacagcgtcg acatgagccg ccagatcctt 481 acgctcaacg tcaacctcat gctgggccag gctcaggagt gcctcctgga gaagtcgatg 541 ttggacaaca ggaagagctt tctggtggcc cgcatcagtg cacaggtggt agattactac 601 aaggaggcat gccgggcctt ggagaacccc gacactgcct cactgctggg ccggatccag 661 aaggactgga agaaacttgt gcagatgaag atctactact tcgcagccgt ggctcatctg 721 cacatgggaa agcaggccga ggagcagcag aagttcgggg agcgggttgc atacttccag 781 agcgccctgg acaagctcaa tgaagccatc aagttggcca agggccagcc tgacactgtg 841 caagacgcgc ttcgcttcac tatggatgtc attgggggaa agtacaattc tgccaagaag 901 gacaacgact tcatttacca tgaggctgtc ccagcattgg acacccttca gcctgtaaaa 961 ggagccccct tggtgaagcc cttgccagtg aaccccacag acccagctgt tacaggccct 1021 gacatctttg ccaaactggt acccatggct gcccacgagg cctcgtcact gtacagtgag 1081 gagaaggcca agctgctccg ggagatgatg gccaagattg aggacaagaa tgaggtcctg 1141 gaccagttca tggattcaat gcagttggat cccgagacgg tggacaacct tgatgcctac 1201 agccacatcc caccccagct catggagaag tgcgcggctc tcagcgtccg gcccgacact 1261 gtcaggaacc ttgtacagtc catgcaagtg ctgtcaggtg tgttcacgga tgtggaggct 1321 tccctgaagg acatcagaga tctgttggag gaggatgagc tgctagagca gaagtttcag 1381 gaggcggtgg gccaggcagg ggccatctcc atcacctcca aggctgagct ggcagaggtg 1441 aggcgagaat gggccaagta catggaagtc catgagaagg cctccttcac caacagtgag 1501 ctgcaccgtg ccatgaacct gcacgtcggc aacctgcgcc tgctcagcgg gccgcttgac 1561 caggtccggg ctgccctgcc cacaccggcc ctctccccag aggacaaggc cgtgctgcaa 1621 aacctaaagc gcatcctggc taaggtgcag gagatgcggg accagcgcgt gtccctggag 1681 cagcagctgc gtgagcttat ccagaaagat gacatcactg cctcgctggt caccacagac 1741 cactcagaga tgaagaagtt gttcgaggag cagctgaaaa agtatgacca gctgaaggtg 1801 tacctggagc agaacctggc cgcccaggac cgtgtcctct gtgcactgac agaggccaac 1861 gtgcagtacg cagccgtgcg gcgggtactc agcgacttgg accaaaagtg gaactccacg 1921 ctgcagaccc tggtggcctc gtatgaagcc tatgaggacc tgatgaagaa gtcgcaggag 1981 ggcagggact tctacgcaga tctggagagc aaggtggctg ctctgctgga gcgcacgcag 2041 tccacctgcc aggcccgcga ggctgcccgc cagcagctcc tggacaggga gctgaagaag 2101 aagccgccgc cacggcccac agccccaaag ccgctgctgc cccgcaggga ggagagtgag 2161 gcagtggaag caggagaccc ccctgaggag ctgcgcagcc tcccccctga catggtggct 2221 ggcccacgac tgcctgacac cttcctggga agtgccaccc cgctccactt tcctcccagc 2281 cccttcccca gctccacagg cccaggaccc cactatctct caggcccctt gccccctggt 2341 acctactcgg gccccaccca gctgatacag cccagggccc cagggcccca tgcaatgccc 2401 gtagcacctg ggcctgccct ctacccagcc cctgcctaca caccggagct gggccttgtg 2461 ccccgatcct ccccacagca tggcgtggtg agcagtccct atgtgggggt agggccggcc 2521 ccaccagttg caggtctccc ctcggcccca cctcctcaat tctcaggccc cgagttggcc 2581 atggcggttc ggccagccac caccacagta gatagcatcc aggcgcccat ccccagccac 2641 acagccccac ggccaaaccc cacccctgct cctcccccgc cctgcttccc tgtgccccca 2701 ccgcagccac tgcccacgcc ttacacctac cctgcagggg ctaagcaacc catcccagca 2761 cagcaccact tctcttctgg gatccccgca ggttttccag ccccaaggat tgggccccag 2821 ccccagcccc atcctcagcc ccatccttca caagcgtttg ggcctcagcc cccacagcag 2881 ccccttccac tccagcatcc acatctcttc ccaccccagg ccccaggact cctaccccca 2941 caatccccct acccctatgc ccctcagcct ggggtcctgg ggcagccgcc acccccccta 3001 cacacccagc tctacccagg tcccgctcaa gaccctctgc cagcccactc aggggctctg 3061 cctttcccca gccctgggcc ccctcagcct ccccatcccc cactggcata tggtcctgcc 3121 ccttctacca gacccatggg cccccaggca gcccctctta ccattcgagg gccctcgtct 3181 gctggccagt ccacccctag tccccacctg gtgccttcac ctgccccatc tccagggcct 3241 ggtccggtac cccctcgccc cccagcagca gaaccacccc cttgcctgcg ccgaggcgcc 3301 gcagctgcag acctgctctc ctccagcccg gagagccagc atggcggcac tcagtctcct 3361 gggggtgggc agcccctgct gcagcccacc aaggtggatg cagctgaggg tcgtcggccg 3421 caggccctgc ggctgattga gcgggacccc tatgaacatc ctgagaggct gcggcagttg 3481 cagcaggagc tggaggcctt tcggggtcag ctgggggatg tgggagctct ggacactgtc 3541 tggcgagagc tgcaagatgc gcaggaacat gatgcccgag gccgttccat cgccattgcc 3601 cgctgctact cactgaagaa ccggcaccag gatgtcatgc cctatgacag taaccgtgtg 3661 gtgctgcgct caggcaagga tgactacatc aatgccagct gcgtggaggg gctctcccca 3721 tactgccccc cgctagtggc aacccaggcc ccactgcctg gcacagctgc tgacttctgg 3781 ctcatggtcc atgagcagaa agtgtcagtc attgtcatgc tggtttctga ggctgagatg 3841 gagaagcaaa aagtggcacg ctacttcccc accgagaggg gccagcccat ggtgcacggt 3901 gccctgagcc tggcattgag cagcgtccgc agcaccgaaa cccatgtgga gcgcgtgctg 3961 agcctgcagt tccgagacca gagcctcaag cgctctcttg tgcacctgca cttccccact 4021 tggcctgagt taggcctgcc cgacagcccc agcaacttgc tgcgcttcat ccaggaggtg 4081 cacgcacatt acctgcatca gcggccgctg cacacgccca tcattgtgca ctgcagctct 4141 ggtgtgggcc gcacgggagc ctttgcactg ctctatgcag ctgtgcagga ggtggaggct 4201 gggaacggaa tccctgagct gcctcagctg gtgcggcgca tgcggcagca gagaaagcac 4261 atgctgcagg agaagctgca cctcaggttc tgctatgagg cagtggtgag acacgtggag 4321 caggtcctgc agcgccatgg tgtgcctcct ccatgcaaac ccttggccag tgcaagcatc 4381 agccagaaga accaccttcc tcaggactcc caggacctgg tcctcggtgg ggatgtgccc 4441 atcagctcca tccaggccac cattgccaag ctcagcattc ggcctcctgg ggggttggag 4501 tccccggttg ccagcttgcc aggccctgca gagcccccag gcctcccgcc agccagcctc 4561 ccagagtcta ccccaatccc atcttcctcc ccaccccccc tttcctcccc actacctgag 4621 gctccccagc ctaaggagga gccgccagtg cctgaagccc ccagctcggg gcccccctcc 4681 tcctccctgg aattgctggc ctccttgacc ccagaggcct tctccctgga cagctccctg 4741 cggggcaaac agcggatgag caagcataac tttctgcagg cccataacgg gcaagggctg 4801 cgggccaccc ggccctctga cgaccccctc agccttctgg atccactctg gacactcaac 4861 aagacctgaa caggttttgc ctacctggtc cttacactac atcatcatca tctcatgccc 4921 acctgcccac acccagcaga gcttctcagt gggcacagtc tcttactccc atttctgctg 4981 cctttggccc tgcctggccc agcctgcacc cctgtggggt ggaaatgtac tgcaggctct 5041 gggtcaggtt ctgctccttt atgggacccg acatttttca gctctttgct attgaaataa 5101 taaaccaccc tgttctgtg //