LOCUS AK299551 3066 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ59406 complete cds, highly similar to Hypoxia-inducible factor 1 alpha. ACCESSION AK299551 VERSION AK299551.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3066) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3066 /clone="OCBBF2009118" /clone_lib="OCBBF2" /db_xref="H-InvDB:HIT000494175" /db_xref="taxon:9606" /dev_stage="fetal" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 284..2587 /codon_start=1 /note="highly similar to Hypoxia-inducible factor 1 alpha" /protein_id="BAG61496.1" /transl_table=1 /translation="MRLTISYLRVRKLLDAGDLDIEDDMKAQMNCFYLKALDGFVMVL TDDGDMIYISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQ NTQRSFFLRMKCTLTSRGRTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTC LVLICEPIPHPSNIEIPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYE YYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCI VCVNYVVNGIIQHDLIFSLQQTECVLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKE PDALTLLAPAAGDTIISLGFGSNDTETDDQQLEEVPLYNDVMLPSPNEKLQNINLAMS PLPTAETPKPLRSSADPALNQEVALKLEPNPESLELSFTMPQIQDQTPSPSDGSTRQS SPEPNSPSEYCFYVDSDMVNEFKLELVEKLFAEDTEAKNPFSTQDTDLDLEMLAPYIP MDDDFQLRSFDQLSPLESSSASPESASPQSTVTVFQQTQIQEPTANATTTTATTDELK TVTKDRMEDIKILIASPSPTHIHKETTSATSSPYRDTQSRTASPNRAGKGVIEQTEKS HPRSPNVLSVALSQRTTVPEEELNPKILALQNAQRKRKMEHDGSLFQAVGIGTLLQQP DDHAATTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACRLLGQSMDESGLPQLTSYD CEVNAPIQGSRNLLQGEELLRALDQVN" BASE COUNT 976 a 633 c 598 g 859 t ORIGIN 1 acagtgctgc ctcgtctgag gggacaggag gatcaccctc ttcgtcgctt cggccagtgt 61 gtcgggctgg gccctgacaa gccacctgag gagaggctcg gagccgggcc cggaccccgg 121 cggcgcgaac gacaagaaaa agataagttc tgaacgtcga aaagaaaagt ctcgagatac 181 agccagatct cggcgaagta aagaatctga agttttttat gagcttgctc atcagttgcc 241 acttccacat aatgtgagtt cgcatcttga taaggcctct gtgatgaggc ttaccatcag 301 ctatttgcgt gtgaggaaac ttctggatgc tggtgatttg gatattgaag atgacatgaa 361 agcacagatg aattgctttt atttgaaagc cttggatggt tttgttatgg ttctcacaga 421 tgatggtgac atgatttaca tttctgataa tgtgaacaaa tacatgggat taactcagtt 481 tgaactaact ggacacagtg tgtttgattt tactcatcca tgtgaccatg aggaaatgag 541 agaaatgctt acacacagaa atggccttgt gaaaaagggt aaagaacaaa acacacagcg 601 aagctttttt ctcagaatga agtgtaccct aactagccga ggaagaacta tgaacataaa 661 gtctgcaaca tggaaggtat tgcactgcac aggccacatt cacgtatatg ataccaacag 721 taaccaacct cagtgtgggt ataagaaacc acctatgacc tgcttggtgc tgatttgtga 781 acccattcct cacccatcaa atattgaaat tcctttagat agcaagactt tcctcagtcg 841 acacagcctg gatatgaaat tttcttattg tgatgaaaga attaccgaat tgatgggata 901 tgagccagaa gaacttttag gccgctcaat ttatgaatat tatcatgctt tggactctga 961 tcatctgacc aaaactcatc atgatatgtt tactaaagga caagtcacca caggacagta 1021 caggatgctt gccaaaagag gtggatatgt ctgggttgaa actcaagcaa ctgtcatata 1081 taacaccaag aattctcaac cacagtgcat tgtatgtgtg aattacgttg tgaatggtat 1141 tattcagcac gacttgattt tctcccttca acaaacagaa tgtgtcctta aaccggttga 1201 atcttcagat atgaaaatga ctcagctatt caccaaagtt gaatcagaag atacaagtag 1261 cctctttgac aaacttaaga aggaacctga tgctttaact ttgctggccc cagccgctgg 1321 agacacaatc atatctttag gttttggcag caacgacaca gaaactgatg accagcaact 1381 tgaggaagta ccattatata atgatgtaat gctcccctca cccaacgaaa aattacagaa 1441 tataaatttg gcaatgtctc cattacccac cgctgaaacg ccaaagccac ttcgaagtag 1501 tgctgaccct gcactcaatc aagaagttgc attaaaatta gaaccaaatc cagagtcact 1561 ggaactttct tttaccatgc cccagattca ggatcagaca cctagtcctt ccgatggaag 1621 cactagacaa agttcacctg agcctaatag tcccagtgaa tattgttttt atgtggatag 1681 tgatatggtc aatgaattca agttggaatt ggtagaaaaa ctttttgctg aagacacaga 1741 agcaaagaac ccattttcta ctcaggacac agatttagac ttggagatgt tagctcccta 1801 tatcccaatg gatgatgact tccagttacg ttccttcgat cagttgtcac cattagaaag 1861 cagttccgca agccctgaaa gcgcaagtcc tcaaagcaca gttacagtat tccagcagac 1921 tcaaatacaa gaacctactg ctaatgccac cactaccact gccaccactg atgaattaaa 1981 aacagtgaca aaagaccgta tggaagacat taaaatattg attgcatctc catctcccac 2041 ccacatacat aaagaaacta ctagtgccac atcatcacca tatagagata ctcaaagtcg 2101 gacagcctca ccaaacagag caggaaaagg agtcatagaa cagacagaaa aatctcatcc 2161 aagaagccct aacgtgttat ctgtcgcttt gagtcaaaga actacagttc ctgaggaaga 2221 actaaatcca aagatactag ctttgcagaa tgctcagaga aagcgaaaaa tggaacatga 2281 tggttcactt tttcaagcag taggaattgg aacattatta cagcagccag acgatcatgc 2341 agctactaca tcactttctt ggaaacgtgt aaaaggatgc aaatctagtg aacagaatgg 2401 aatggagcaa aagacaatta ttttaatacc ctctgattta gcatgtagac tgctggggca 2461 atcaatggat gaaagtggat taccacagct gaccagttat gattgtgaag ttaatgctcc 2521 tatacaaggc agcagaaacc tactgcaggg tgaagaatta ctcagagctt tggatcaagt 2581 taactgagct ttttcttaat ttcattcctt tttttggaca ctggtggctc actacctaaa 2641 gcagtctatt tatattttct acatctaatt ttagaagcct ggctacaata ctgcacaaac 2701 ttggttagtt caatttttga tcccctttct acttaattta cattaatgct cttttttagt 2761 atgttcttta atgctggatc acagacagct cattttctca gttttttggt atttaaacca 2821 ttgcattgca gtagcatcat tttaaaaaat gcaccttttt atttatttat ttttggctag 2881 ggagtttatc cctttttcga attattttta agaagatgcc aatataattt ttgtaagaag 2941 gcagtaacct ttcatcatga tcataggcag ttgaaaaatt tttacacctt ttttttcaca 3001 ttttacataa ataataatgc tttgccagca gtacgtggta gccacaattg cacaatatat 3061 tttctt //