LOCUS AK296899 1673 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ54330 complete cds, highly similar to Usher syndrome type-1G protein. ACCESSION AK296899 VERSION AK296899.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1673) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1673 /clone="CTONG2026498" /clone_lib="CTONG2" /db_xref="H-InvDB:HIT000491523" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="tumor tissue" /organism="Homo sapiens" /tissue_type="tongue, tumor tissue" CDS 440..1516 /codon_start=1 /note="highly similar to Usher syndrome type-1G protein" /protein_id="BAG59457.1" /transl_table=1 /translation="MAAMKGHMECVRYLDSIAAKQSSLNPKLVGKLKDKAFREAERRI RECAKLQRRHHERMERRYRRELAERSDTLSFSSLTSSTLSRRLQHLALGSHLPYSQAT LHGTARGKAKMQKKLERRKQGGEGTFKVSEDGRKSARSLSGLQLGSDVMFVRQGTYAN PKEWGRAPLRDMFLSDEDSVSRATLAAEPAHSEVSTDSGHDSLFTRPGLGTMVFRRNY LSSGLHGLGREDGGLDGVGAPRGRLQSSPSLDDDSLGSANSLQDRSCGEELPWDELDL GLDEDLEPETSPLETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRK KILGAVRRRRQAMERPPALEDTEL" BASE COUNT 294 a 580 c 536 g 263 t ORIGIN 1 cagatgtctt ggtagtcgcg gctctggcgc tccgcaccct ccgtctgcgg cagcgggggc 61 tggcggcccc ggcccctgcc cggccccgtc ctccaacctc atgcctcagc cctaataccg 121 ccgccctccc ctgcgggggg cctttctccg tgtcccccgc ccgccccgtc cacttcgggc 181 gccatgaacg accagtacca ccgggcagcc cgggatggct acctggagct cctcaaggag 241 gccacccgaa aggagctgaa tgcccccgac gaggatggca tgacccccac tctctgggct 301 gcctaccatg gcaacctcga gtcgctgcgt ctcattgtga gccgcggctt ccaatggcca 361 cctgcactgc ctgtccttcc tggtgtcctt cggagccaac atctggtgcc tagacaacga 421 ctaccacacg ccgctggaca tggctgccat gaagggccac atggaatgcg tgcgctacct 481 ggactccatc gcggccaagc agagcagcct caaccccaag ctggtgggta agctgaagga 541 caaggccttc cgcgaggcgg agcggcgcat ccgcgagtgc gccaagctgc agcggaggca 601 ccacgaacgc atggagcggc gataccggcg cgagctggcc gagcgttccg acaccctcag 661 cttctccagc ctcacgtcca gcaccctgag ccgccggctg cagcatctgg cgctgggcag 721 ccacctgccg tactctcagg ccacgctgca cggcacggcc aggggcaagg ccaagatgca 781 gaagaagctg gagcggcgca agcagggcgg cgaaggcacc ttcaaggtct ccgaggatgg 841 gcgcaagagc gcccgctcgc tctcgggcct gcagctgggc agcgacgtga tgttcgtgcg 901 ccagggcacc tacgccaatc ccaaggagtg gggccgagcc ccgctccggg acatgttcct 961 ctcggacgag gacagcgtct cccgtgccac gctggcggcc gagcctgccc actcggaggt 1021 cagcaccgac tcaggccacg actccctgtt tacccgcccc ggcctgggca ccatggtgtt 1081 ccgcagaaat tacttgagca gtgggctgca cggactgggc cgcgaggatg ggggtctgga 1141 tggggtggga gcgccgcggg gtcggctgca gagctccccc agcctggacg atgacagcct 1201 gggcagtgcc aacagcctgc aggaccgcag ctgtggggag gagctgccct gggatgagct 1261 cgatttaggc ttggacgagg acctggagcc cgagactagc ccgctggaga ccttcctggc 1321 ctctctgcac atggaggact ttgccgccct cctgcggcag gagaagatcg acctcgaggc 1381 tttgatgctg tgctctgacc tcgacctccg cagcatcagc gtcccactgg ggccccgaaa 1441 gaagatcttg ggggccgtga ggaggcggcg gcaggcgatg gagcgcccgc cggccctgga 1501 ggacacagag ctataaccgg gggctcctct ccccagacca aaatgaattg caagttgcca 1561 caacctatgg tggggtctcg aggtcctcac agttgccagc cctgcagccc ccttccccag 1621 gagcaaggac cagttggggc gactcctttg aaagtctgtc tgcaccttga agc //