LOCUS AK296510 3892 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ55300 partial cds, highly similar to DNA topoisomerase 2-beta (EC 5.99.1.3). ACCESSION AK296510 VERSION AK296510.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3892) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3892 /clone="BRTHA3022466" /clone_lib="BRTHA3" /db_xref="H-InvDB:HIT000491134" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thalamus" CDS 359..>3892 /codon_start=1 /note="highly similar to DNA topoisomerase 2-beta (EC 5.99.1.3)" /protein_id="BAG59142.1" /transl_table=1 /translation="MWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTC IKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGR NGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKIKHFDGEDYTCITFQ PDLSKFKMEKLDKDIVALMTRRAYDLAGSCRGVKVMFNGKKLPVNGFRSYVGLYVKDK LDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGK LIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQPKSFGSKCQL SEKFFKAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHS LECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNI IKIVGLRYKKSYDDAESLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHG FLEEFITPIVKASKNKQELSFYSIPEFDEWKKHIENQKAWKIKYYKGLGTSTAKEAKE YFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQF LYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREV KVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDA ASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGT GWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQYAVSGEIFVV DRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTE EKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGL RKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAW KEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAK GREVNDLKRKSPSDLWKEDLAAFVEELDKVESQEREDVLAGMSGKAIKGKVGKPKVKK LQLEETMPSPYGRRIIPEITAMKADASKKLLK" BASE COUNT 1302 a 618 c 891 g 1081 t ORIGIN 1 gtgtgtgcgg tgttatgccg gacaagaggg aggtgaccgt ggcggcggcg gcggcggctc 61 tgtttattgt ccctctcggt gtgtgtgtgt gaggaaatcg gggctgcagc gaggctaagg 121 ctgcctttga agcagcggcg gcgaccggga cgactactct ggcaacgggg cactgacctg 181 ggtgactctt tttgatcaga acaatgctgc aaaaaaagaa gagtcagaaa ctgccaacaa 241 aaatgattct tcaaagaagt tgtctgttga gagagtgtat cagaagaaga cacaacttga 301 acacattctt cttcgtcctg atacatatat tgggtcagtg gagccattga cgcagttcat 361 gtgggtgtat gatgaagatg taggaatgaa ttgcagggag gttacctttg tgccaggttt 421 atacaagatc tttgatgaaa ttttggttaa tgctgctgac aataaacaga gggataagaa 481 catgacttgt attaaagttt ctattgatcc tgaatctaac attataagca tttggaataa 541 tgggaaaggc attccagtag tagaacacaa ggtagagaaa gtttatgttc ctgctttaat 601 ttttggacag cttttaacat ccagtaacta tgatgatgat gagaaaaaag ttacaggtgg 661 tcgtaatggt tatggtgcaa aactttgtaa tattttcagt acaaagttta cagtagaaac 721 agcttgcaaa gaatacaaac acagttttaa gcagacatgg atgaataata tgatgaagac 781 ttctgaagcc aaaattaaac attttgatgg tgaagattac acatgcataa cattccaacc 841 agatctgtcc aaatttaaga tggaaaaact tgacaaggat attgtggccc tcatgactag 901 aagggcatat gatttggctg gttcgtgtag aggggtcaag gtcatgttta atggaaagaa 961 attgcctgta aatggatttc gcagttatgt aggtctttat gtgaaagaca aattggatga 1021 aactggggtg gccctgaaag ttattcatga gcttgcaaat gaaagatggg atgtttgtct 1081 cacattgagt gaaaaaggat tccagcaaat cagctttgta aatagtattg caactacaaa 1141 aggtggacgg cacgtggatt atgtggtaga tcaagttgtt ggtaaactga ttgaagtagt 1201 taagaaaaag aacaaagctg gtgtatcagt gaaaccattt caagtaaaaa accatatatg 1261 ggtttttatt aattgcctta ttgaaaatcc aacttttgat tctcagacta aggaaaacat 1321 gactctgcag cccaaaagtt ttgggtctaa atgccagctg tcagaaaaat tttttaaagc 1381 agcctctaat tgtggcattg tagaaagtat cctgaactgg gtgaaattta aggctcagac 1441 tcagctgaat aagaagtgtt catcagtaaa atacagtaaa atcaaaggta ttcccaaact 1501 ggatgatgct aatgatgctg gtggtaaaca ttccctggag tgtacactga tattaacaga 1561 gggagactct gccaaatcac tggctgtgtc tggattaggt gtgattggac gagacagata 1621 cggagttttt ccactcaggg gcaaaattct taatgtacgg gaagcttctc ataaacagat 1681 catggaaaat gctgaaataa ataatattat taaaatagtt ggtctacgat ataagaaaag 1741 ttacgatgat gcagaatctc tgaaaacctt acgctatgga aagattatga ttatgaccga 1801 tcaggatcaa gatggttctc acataaaagg cctgcttatt aatttcatcc atcacaattg 1861 gccatcactt ttgaagcatg gttttcttga agagttcatt actcctattg taaaggcaag 1921 caaaaataag caggaacttt ccttctacag tattcctgaa tttgacgaat ggaaaaaaca 1981 tatagaaaac cagaaagcct ggaaaataaa gtactataaa ggattgggta ctagtacagc 2041 taaagaagca aaggaatatt ttgctgatat ggaaaggcat cgcatcttgt ttagatatgc 2101 tggtcctgaa gatgatgctg ccattacctt ggcatttagt aagaagaaga ttgatgacag 2161 aaaagaatgg ttaacaaatt ttatggaaga ccggagacag cgtaggctac atggcttacc 2221 agagcaattt ttatatggta ctgcaacaaa gcatttgact tataatgatt tcatcaacaa 2281 ggaattgatt ctcttctcaa actcagacaa tgaaagatct ataccatctc ttgttgatgg 2341 ctttaaacct ggccagcgga aagttttatt tacctgtttc aagaggaatg ataaacgtga 2401 agtaaaagtt gcccagttgg ctggctctgt tgctgagatg tcggcttatc atcatggaga 2461 acaagcattg atgatgacta ttgtgaattt ggctcagaac tttgtgggaa gtaacaacat 2521 taacttgctt cagcctattg gtcagtttgg aactcggctt catggtggca aagatgctgc 2581 aagccctcgt tatattttca caatgttaag cactttagca aggctacttt ttcctgctgt 2641 ggatgacaac ctccttaagt tcctttatga tgataatcaa cgtgtagagc ctgagtggta 2701 tattcctata attcccatgg ttttaataaa tggtgctgag ggcattggta ctggatgggc 2761 ttgtaaacta cccaactatg atgctaggga aattgtgaac aatgtcagac gaatgctaga 2821 tggcctggat cctcatccca tgcttccaaa ctacaaaaac tttaaaggca cgattcaaga 2881 acttggtcaa aaccagtatg cagtcagtgg tgaaatattt gtagtggaca gaaacacagt 2941 agaaattaca gagcttccag ttagaacttg gacacaggta tataaagaac aggttttaga 3001 acctatgcta aatggaacag ataaaacacc agcattaatt tctgattata aagaatatca 3061 tactgacaca actgtgaaat ttgtggtgaa aatgactgaa gagaaactag cacaagcaga 3121 agctgctgga ctgcataaag tttttaaact tcaaactact cttacttgta attccatggt 3181 actttttgat catatgggat gtctgaagaa atatgaaact gtgcaagaca ttctgaaaga 3241 attctttgat ttacgattaa gttattacgg tttacgtaag gagtggcttg tgggaatgtt 3301 gggagcagaa tctacaaagc ttaacaatca agcccgtttc attttagaga agatacaagg 3361 gaaaattact atagagaata ggtcaaagaa agatttgatt caaatgttag tccagagagg 3421 ttatgaatct gacccagtga aagcctggaa agaagcacaa gaaaaggcag cagaagagga 3481 tgaaacacaa aaccagcatg atgatagttc ctccgattca ggaactcctt caggcccaga 3541 ttttaattat attttaaata tgtctctgtg gtctcttact aaagaaaaag ttgaagaact 3601 gattaaacag agagatgcaa aagggcgaga ggtcaatgat cttaaaagaa aatctccttc 3661 agatctttgg aaagaggatt tagcggcatt tgttgaagaa ctggataaag tggaatctca 3721 agaacgagaa gatgttctgg ctggaatgtc tggaaaagca attaaaggta aagttggcaa 3781 acctaaggtg aagaaactcc agttggaaga gacaatgccc tcaccttatg gcagaagaat 3841 aattcctgaa attacagcta tgaaggcaga tgccagcaaa aagttgctga ag //