LOCUS AK295888 4741 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ53444 complete cds, highly similar to Tyrosine-protein phosphatase non-receptor type 23 (EC 3.1.3.48). ACCESSION AK295888 VERSION AK295888.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4741) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4741 /clone="BRHIP3042077" /clone_lib="BRHIP3" /db_xref="H-InvDB:HIT000490512" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="hippocampus" CDS 84..2822 /codon_start=1 /note="highly similar to Tyrosine-protein phosphatase non-receptor type 23 (EC 3.1.3.48)" /protein_id="BAG58683.1" /transl_table=1 /translation="MEAVPRMPMIWLDLKEAGDFHFQPAVKKNAVRVPRDFEGCSVLR KYLGQLHYLQSRVPMGSGQEAAVPVTWTEIFSGKSVAHEDIKYEQACILYNLGALHSM LGAMDKRVSEECAAGAFAYLREHFPQAYSVDMSRQILTLNVNLMLGQAQECLLEKSML DNRKSFLVARISAQVVDYYKEACRALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAH LHMGKQAEEQQKFGERVAYFQSALDKLNEAIKLAKGQPDTVQDALRFTMDVIGGKYNS AKKDNDFIYHEAVPALDTLQPVKGAPLVKPLPVNPTDPAVTGPDIFAKLVPMAAHEAS SLYSEEKAKLLREMMAKIEDKNEVLDQFMDSMQLDPETVDNLDAYSHIPPQLMEKCAA LSVRPDTVRNLVQSMQVLSGVFTDVEASLKDIRDLLEEDELLEQKFQEAVGQAGAISI TSKAELAEVRREWAKYMEVHEKASFTNSELHRAMNLHVGNLRLLSGPLDQVRAALPTP ALSPEDKAVLQNLKRILAKVQEMRDQRVSLEQQLRELIQKDDITASLVTTDHSEMKKL FEEQLKKYDQLKVYLEQNLAAQDRVLCALTEADVQYAAVRRVLSDLDQKWNSTLQTLV ASYEAYEDLMKKSQEGRDFYADLESKVAALLERTQSTCQAREAARQQLLDRELKKKPP PRPTAPKPLLPRREESEAVEAGDPPEELRSLPPDMVAGPRLPDTFLGSATPLHFPPSP FPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAPGPHAMPVAPGPALYPAPSSAPSFTS VWASAPTAAPSTPASTSLPTPGPRTPTPTIPLPLCPSAWGPGAAATPPTHPALPRSRS RPSASPLRGSAFPQPWAPSASPSPTGIWSCPFYQTHGPPGSPSYHSRALVCWPVHP" BASE COUNT 941 a 1606 c 1336 g 858 t ORIGIN 1 aaggggcggg gctgggctcg tggctgagcc agcagctgca gcagctacgg gagtggccgg 61 gtggccggcg ggtgccagcc gccatggagg ccgtgccccg catgcccatg atctggctgg 121 acctgaagga ggccggtgac tttcacttcc agccagctgt gaagaagaat gctgtccgtg 181 tcccacgaga ctttgagggc tgtagtgtcc tccgcaagta cctcggccag cttcattacc 241 tgcagagtcg ggtccccatg ggctcgggcc aggaggccgc tgtccctgtc acctggacag 301 agatcttctc aggcaagtct gtggcccatg aggacatcaa gtacgagcag gcctgtattc 361 tctacaacct tggagcgctg cactccatgc tgggggccat ggacaagcgg gtgtctgagg 421 agtgcgcagc cggcgccttc gcctacctac gggagcactt ccctcaagcc tacagcgtcg 481 acatgagccg ccagatcctt acgctcaacg tcaacctcat gctgggccag gctcaggagt 541 gcctcctgga gaagtcgatg ttggacaaca ggaagagctt tctggtggcc cgcatcagtg 601 cacaggtggt agattactac aaggaggcat gccgggcctt ggagaacccc gacactgcct 661 cactgctggg ccggatccag aaggactgga agaaacttgt gcagatgaag atctactact 721 tcgcagccgt ggctcatctg cacatgggaa agcaggccga ggagcagcag aagttcgggg 781 agcgggttgc atacttccag agcgccctgg acaagctcaa tgaagccatc aagttggcca 841 agggccagcc tgacactgtg caagacgcgc ttcgcttcac tatggatgtc attgggggaa 901 agtacaattc tgccaagaag gacaacgact tcatttacca tgaggctgtc ccagcattgg 961 acacccttca gcctgtaaaa ggagccccct tggtgaagcc cttgccagtg aaccccacag 1021 acccagctgt tacaggccct gacatctttg ccaaactggt acccatggct gcccacgagg 1081 cctcgtcact gtacagtgag gagaaggcca agctgctccg ggagatgatg gccaagattg 1141 aggacaagaa tgaggtcctg gaccagttca tggattcaat gcagttggat cccgagacgg 1201 tggacaacct tgatgcctac agccacatcc caccccagct catggagaag tgcgcggctc 1261 tcagcgtccg gcccgacact gtcaggaacc ttgtacagtc catgcaagtg ctgtcaggtg 1321 tgttcacgga tgtggaggct tccctgaagg acatcagaga tctgttggag gaggatgagc 1381 tgctagagca gaagtttcag gaggcggtgg gccaggcagg ggccatctcc atcacctcca 1441 aggctgagct ggcagaggtg aggcgagaat gggccaagta catggaagtc catgagaagg 1501 cctccttcac caacagtgag ctgcaccgtg ccatgaacct gcacgtcggc aacctgcgcc 1561 tgctcagcgg gccgcttgac caggtccggg ctgccctgcc cacaccggcc ctctccccag 1621 aggacaaggc cgtgctgcaa aacctaaagc gcatcctggc taaggtgcag gagatgcggg 1681 accagcgcgt gtccctggag cagcagctgc gtgagcttat ccagaaagat gacatcactg 1741 cctcgctggt caccacagac cactcagaga tgaagaagtt gttcgaggag cagctgaaaa 1801 agtatgacca gctgaaggtg tacctggagc agaacctggc cgcccaggac cgtgtcctct 1861 gtgcactgac agaggccgac gtgcagtacg cagccgtgcg gcgggtactc agcgacttgg 1921 accaaaagtg gaactccacg ctgcagaccc tggtggcctc gtatgaagcc tatgaggacc 1981 tgatgaagaa gtcgcaggag ggcagggact tctacgcaga tctggagagc aaggtggctg 2041 ctctgctgga gcgcacgcag tccacctgcc aggcccgcga ggctgcccgc cagcagctcc 2101 tggacaggga gctgaagaag aagccgccgc cacggcccac agccccaaag ccgctgctgc 2161 cccgcaggga ggagagtgag gcagtggaag caggagaccc ccctgaggag ctgcgcagcc 2221 tcccccctga catggtggct ggcccacgac tgcctgacac cttcctggga agtgccaccc 2281 cgctccactt tcctcccagc cccttcccca gctccacagg cccaggaccc cactatctct 2341 caggcccctt gccccctggt acctactcgg gccccaccca gctgatacag cccagggccc 2401 cagggcccca tgcaatgccc gtagcacctg ggcctgccct ctacccagcc ccatcctcag 2461 ccccatcctt cacaagcgtt tgggcctcag cccccacagc agccccttcc actccagcat 2521 ccacatctct tcccacccca ggccccagga ctcctacccc cacaatcccc ctacccctat 2581 gcccctcagc ctggggtcct ggggcagccg ccaccccccc tacacaccca gctctaccca 2641 ggtcccgctc aagaccctct gccagcccac tcaggggctc tgcctttccc cagccctggg 2701 ccccctcagc ctccccatcc cccactggca tatggtcctg ccccttctac cagacccatg 2761 ggcccccagg cagcccctct taccattcga gggccctcgt ctgctggcca gtccacccct 2821 agtccccacc tggtgccttc acctgcccca tctccagggc ctggtccggt accccctcgc 2881 cccccagcag cagaaccacc cccttgcctg cgccgaggcg ccgcagctgc agacctgctc 2941 tcctccagcc cggagagcca gcatggcggc actcagtctc ctgggggtgg gcagcccctg 3001 ctgcagccca ccaaggtgga tgcagctgag ggtcgtcggc cgcaggccct gcggctgatt 3061 gagcgggacc cctatgagca tcctgagagg ctgcggcagt tgcagcagga gctggaggcc 3121 tttcggggtc agctggggga tgtgggagct ctggacactg tctggcgaga gctgcaagat 3181 gcgcaggaac atgatgcccg aggccgttcc atcgccattg cccgctgcta ctcactgaag 3241 aaccggcacc aggatgtcat gccctatgac agtaaccgtg tggtgctgcg ctcaggcaag 3301 gatgactaca tcaatgccag ctgcgtggag gggctctccc catactgccc cccgctagtg 3361 gcaacccagg ccccactgcc tggcacagct gctgacttct ggctcatggt ccatgagcag 3421 aaagtgtcag tcattgtcat gctggtttct gaggctgaga tggagaagca aaaagtggca 3481 cgctacttcc ccaccgagag gggccagccc atggtgcacg gtgccctgag cctggcattg 3541 agcagcgtcc gcagcaccga aacccatgtg gagcgcgtgc tgagcctgca gttccgagac 3601 cagagcctca agcgctctct tgtgcacctg cacttcccca cttggcctga gttaggcctg 3661 cccgacagcc ccagcaactt gctgcgcttc atccaggagg tgcacgcaca ttacctgcat 3721 cagcggccgc tgcacacgcc catcattgtg cactgcagct ctggtgtggg ccgcacggga 3781 gcctttgcac tgctctatgc agctgtgcag gaggtggagg ctgggaacgg aatccctgag 3841 ctgcctcagc tggtgcggcg catgcggcag cagagaaagc acatgctgca ggagaagctg 3901 cacctcaggt tctgctatga ggcagtggtg agacacgtgg agcaggtcct gcagcgccat 3961 ggtgtgcctc ctccatgcaa acccttggcc agtgcaagca tcagccagaa gaaccacctt 4021 cctcaggact cccaggacct ggtcctcggt ggggatgtgc ccatcagctc catccaggcc 4081 accattgcca agctcagcat tcggcctcct ggggggttgg agtccccggt tgccagcttg 4141 ccaggccctg cagagccccc aggcctcccg ccagccagcc tcccagagtc taccccaatc 4201 ccatcttcct ccccaccccc cctttcctcc ccactacctg aggctcccca gcctaaggag 4261 gagccgccag tgcctgaagc ccccagctcg gggcccccct cctcctccct ggaattgctg 4321 gcctccttga ccccagaggc cttctccctg gacagctccc tgcggggcaa acagcggatg 4381 agcaagcata actttctgca ggcccataac gggcaagggc tgcgggccac ccggccctct 4441 gacgaccccc tcagccttct ggatccactc tggacactca acaagacctg aacaggtttt 4501 gcctacctgg tccttacact acatcatcat catctcatgc ccacctgccc acacccagca 4561 gagcttctca gtgggcacag tctcttactc ccatttctgc tgcctttggc cctgcctggc 4621 ccagcctgca cccctgtggg gtggaaatgt actgcaggct ctgggtcagg ttctgctcct 4681 ttatgggacc cgacattttt cagctctttg ctattgaaat aataaaccac cctgttctgt 4741 g //