LOCUS AK295877 4044 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ58355 complete cds, highly similar to Tyrosine-protein phosphatase non-receptor type 23 (EC 3.1.3.48). ACCESSION AK295877 VERSION AK295877.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4044) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4044 /clone="BRHIP3041193" /clone_lib="BRHIP3" /db_xref="H-InvDB:HIT000490501" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="hippocampus" CDS 36..3797 /codon_start=1 /note="highly similar to Tyrosine-protein phosphatase non-receptor type 23 (EC 3.1.3.48)" /protein_id="BAG58674.1" /transl_table=1 /translation="MEAVPRMPMIWLDLKEAGDFHFQPAVKKFVLKNYGENPEAYNEE LKKLELLRQNAVRVPRDFEGCSVLRKYLGQLHYLQSRVPMGSGQEAAVPVTWTEIFSG KSVAHEDIKYEQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREH FPQAYSVDMSRQILTLNVNLMLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEAC RALENPDTALLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGERVAYFQSA LDKLNEAIKLAKGQPDTVQDALRFTMDVIGGKYNSAKKDNDFIYHEAVPALDTLQPVK GAPLVKPLPVNPTDPAVTGPDIFAKLVPMAAHEASSLYSEEKAKLLREMMAKIEDKNE VLDQFMDSMQLDPETVDNLDAYSHIPPQLMEKCAALSVRPDTVRNLVQSMQVLSGVFT DVEASLKDIRDLLEEDELLEQKFQEAVGQAGAISITSKAELAEVRREWAKYMEVHEKA SFTNSELHRAMNLHVGNLRLLSGPLDQVRAALPTPALSPEDKAVLQNLKRILAKVQEM RDQRVSLEQQLRELIQKDDITASLVTTDHSEMKKLFEEQLKKYDQLKVYLEQNLAAQD RVLCALTEANVQYAAVRRVLSDLDQKWNSTLQTLVASYEAYEDLMKKSQEGRDFYADL ESKVAALLERTQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSS PESQHGGTQSPGGGQPLLQPTKVDAAEGRRPQALRLIERDPYEHPERLRQLQQELEAF RGQLGDVGALDTVWRELQDAQEHDARGRSIAIARCYSLKNRHQDVMPYDSNRVVLRSG KDDYINASCVEGLSPYCPPLVATQAPLPGTAADFWLMVHEQKVSVIVMLVSEAEMEKQ KVARYFPTERAQPMVHGALSLALSSVRSTETHVERVLSLQFRDQSLKRSLVHLHFPTW PELGLPDSPSNLLRFIQEVHAHYLHQRPLHTPIIVHCSSGVGRTGAFALLYAAVQEVE AGNGIPELPQLVRRMRQQRKHMLQEKLHLRFCYEAVVRHVEQVLQRHGVPPPCKPLAS ASISQKNHLPQDSQDLVLGGDVPISSIQATIAKLSIRPPGGLESPVASLPGPAEPPGL PPASLPESTPVPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSSSLELLASLTPEA FSLDSSLRGKQRMSKHNFLQAHNGQGLRATRPSDDPLSLLDPLWTLNKT" BASE COUNT 841 a 1267 c 1172 g 764 t ORIGIN 1 gggagtggcc gggtggccgg cgggtgccag ccgccatgga ggccgtgccc cgcatgccca 61 tgatctggct ggacctgaag gaggccggtg actttcactt ccagccagct gtgaagaagt 121 ttgtcctgaa gaattatgga gagaacccag aagcctacaa tgaagaactg aagaagctgg 181 agttgctcag acagaatgct gtccgtgtcc cacgagactt tgagggctgt agtgtcctcc 241 gcaagtacct cggccagctt cattacctgc agagtcgggt ccccatgggc tcgggccagg 301 aggccgctgt ccctgtcacc tggacagaga tcttctcagg caagtctgtg gcccatgagg 361 acatcaagta cgagcaggcc tgtattctct acaaccttgg agcgctgcac tccatgctgg 421 gggccatgga caagcgggtg tctgaggagg gcatgaaggt ctcctgtacc catttccagt 481 gcgcagccgg cgccttcgcc tacctacggg agcacttccc tcaagcctac agcgtcgaca 541 tgagccgcca gatccttacg ctcaacgtca acctcatgct gggccaggct caggagtgcc 601 tcctggagaa gtcgatgttg gacaacagga agagctttct ggtggcccgc atcagtgcac 661 aggtggtaga ttactacaag gaggcatgcc gggccttgga gaaccccgac actgccttac 721 tgctgggccg gatccagaag gactggaaga aacttgtgca gatgaagatc tactacttcg 781 cagccgtggc tcatctgcac atgggaaagc aggccgagga gcagcagaag ttcggggagc 841 gggttgcata cttccagagc gccctggaca agctcaatga agccatcaag ttggccaagg 901 gccagcctga cactgtgcaa gacgcgcttc gcttcactat ggatgtcatt gggggaaagt 961 acaattctgc caagaaggac aacgacttca tttaccatga ggctgtccca gcattggaca 1021 cccttcagcc tgtaaaagga gcccccttgg tgaagccctt gccagtgaac cccacagacc 1081 cagctgttac aggccctgac atctttgcca aactggtacc catggctgcc cacgaggcct 1141 cgtcactgta cagtgaggag aaggccaagc tgctccggga gatgatggcc aagattgagg 1201 acaagaatga ggtcctggac cagttcatgg attcaatgca gttggatccc gagacggtgg 1261 acaaccttga tgcctacagc cacatcccac cccagctcat ggagaagtgc gcggctctca 1321 gcgtccggcc cgacactgtc aggaaccttg tacagtccat gcaagtgctg tcaggtgtgt 1381 tcacggatgt ggaggcttcc ctgaaggaca tcagagatct gttggaggag gatgagctgc 1441 tagagcagaa gtttcaggag gcggtgggcc aggcaggggc catctccatc acctccaagg 1501 ctgagctggc agaggtgagg cgagaatggg ccaagtacat ggaagtccat gagaaggcct 1561 ccttcaccaa cagtgagctg caccgtgcca tgaacctgca cgtcggcaac ctgcgcctgc 1621 tcagcgggcc gcttgaccag gtccgggctg ccctgcccac accggccctc tccccagagg 1681 acaaggccgt gctgcaaaac ctaaagcgca tcctggctaa ggtgcaggag atgcgggacc 1741 agcgcgtgtc cctggagcag cagctgcgtg agcttatcca gaaagatgac atcactgcct 1801 cgctggtcac cacagaccac tcagagatga agaagttgtt cgaggagcag ctgaaaaagt 1861 atgaccagct gaaggtgtac ctggagcaga acctggccgc ccaggaccgt gtcctctgtg 1921 cactgacaga ggccaacgtg cagtacgcag ccgtgcggcg ggtactcagc gacttggacc 1981 aaaagtggaa ctccacgctg cagaccctgg tggcctcgta tgaagcctat gaggacctga 2041 tgaagaagtc gcaggagggc agggacttct acgcagatct ggagagcaag gtggctgctc 2101 tgctggagcg cacgcagtcc acccctagtc cccacctggt gccttcacct gccccatctc 2161 cagggcctgg tccggtaccc cctcgccccc cagcagcaga accaccccct tgcctgcgcc 2221 gaggcgccgc agctgcagac ctgctctcct ccagcccgga gagccagcat ggcggcactc 2281 agtctcctgg gggtgggcag cccctgctgc agcccaccaa ggtggatgca gctgagggtc 2341 gtcggccgca ggccctgcgg ctgattgagc gggaccccta tgaacatcct gagaggctgc 2401 ggcagttgca gcaggagctg gaggcctttc ggggtcagct gggggatgtg ggagctctgg 2461 acactgtctg gcgagagctg caagatgcgc aggaacatga tgcccgaggc cgttccatcg 2521 ccattgcccg ctgctactca ctgaagaacc ggcaccagga tgtcatgccc tatgacagta 2581 accgtgtggt gctgcgctca ggcaaggatg actacatcaa tgccagctgc gtggaggggc 2641 tctccccata ctgccccccg ctagtggcaa cccaggcccc actgcctggc acagctgctg 2701 acttctggct catggtccat gagcagaaag tgtcagtcat tgtcatgctg gtttctgagg 2761 ctgagatgga gaagcaaaaa gtggcacgct acttccccac cgagagggcc cagcccatgg 2821 tgcacggtgc cctgagcctg gcattgagca gcgtccgcag caccgaaacc catgtggagc 2881 gcgtgctgag cctgcagttc cgagaccaga gcctcaagcg ctctcttgtg cacctgcact 2941 tccccacttg gcctgagtta ggcctgcccg acagccccag caacttgctg cgcttcatcc 3001 aggaggtgca cgcacattac ctgcatcagc ggccgctgca cacgcccatc attgtgcact 3061 gcagctctgg tgtgggccgc acgggagcct ttgcactgct ctatgcagct gtgcaggagg 3121 tggaggctgg gaacggaatc cctgagctgc ctcagctggt gcggcgcatg cggcagcaga 3181 gaaagcacat gctgcaggag aagctgcacc tcaggttctg ctatgaggca gtggtgagac 3241 acgtggagca ggtcctgcag cgccatggtg tgcctcctcc atgcaaaccc ttggccagtg 3301 caagcatcag ccagaagaac caccttcctc aggactccca ggacctggtc ctcggtgggg 3361 atgtgcccat cagctccatc caggccacca ttgccaagct cagcattcgg cctcctgggg 3421 ggttggagtc cccggttgcc agcttgccag gccctgcaga gcccccaggc ctcccgccag 3481 ccagcctccc agagtctacc ccagtcccat cttcctcccc accccccctt tcctccccac 3541 tacctgaggc tccccagcct aaggaggagc cgccagtgcc tgaagccccc agctcggggc 3601 ccccctcctc ctccctggaa ttgctggcct ccttgacccc agaggccttc tccctggaca 3661 gctccctgcg gggcaaacag cggatgagca agcataactt tctgcaggcc cataacgggc 3721 aagggctgcg ggccacccgt ccctctgacg accccctcag ccttctggat ccactctgga 3781 cactcaacaa gacctgaaca ggttttgcct acctggtcct tacactacat catcatctca 3841 tgcccacctg cccacaccca gcagagcttc tcagtgggca cagtctctta ctcccatttc 3901 tgctgccttt ggccctgcct ggcccagcct gcacccctgt ggggtggaaa tgtactgcag 3961 gctctgggtc aggttctgct cctttatggg acccgacatt tttcagctct ttgctattga 4021 aataataaac caccctgttc tgtg //