LOCUS AK295686 3347 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ50168 complete cds, highly similar to Peroxisome biogenesis factor 1. ACCESSION AK295686 VERSION AK295686.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3347) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3347 /clone="BRHIP3012262" /clone_lib="BRHIP3" /db_xref="H-InvDB:HIT000490310" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="hippocampus" CDS 7..2892 /codon_start=1 /note="highly similar to Peroxisome biogenesis factor 1" /protein_id="BAG58539.1" /transl_table=1 /translation="MWGSDRLAGAGGGGAAVTVAFTNARDCFLHLPRRLVAQLHLLQN QAIEVVWSHQPAFLSWVEGRHFSDQGENVAEINRRVGQKLGLSNGGQIPDDLRKRLNI EMHAVVRITPVEVTPKIPRSLKLQPRENLPKDISEEDIKTVFYSWLQQSTTTMLPLVI SEEEFIKLETKDGLKEFSLSIVHSWEKEKDKNIFLLSPNLLQKTTIQVLLDPMVKEEN SEEIDFILPFLKLSSLGGVNSLGVSSLEHITHSLLGRPLSRQLMSLVAGLRNGALLLT GGKGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEAVWMQP SVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIATSQS QQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHV AKETGGFVARDFTVLVDRAIHSRLSRQSISTREKLVLTTLDFQKALRGFLPASLRSVN LHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKT LLAGVIARGSRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIA PRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVY CPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEALHGM LLSSGLQDGSSSSDSDLSLSSMVFLNHSSGSDDSAGDGECGLDQSLVSLEMSEILPDE SKFNMYRLYFGSSYESELGNGTSSDLSSQCLSAPSSMTQDLPGVPGKDQLFSQPPVLR TASQEGCQELTQEQRDQLRADISIIKGRYRSQSGEDESMNQPGPIKTRLAISQSHLMT ALGHTRPSISEDDWKNFAELYESFQNPKRRKNQSGTMFRPGQKVTLA" BASE COUNT 1009 a 649 c 743 g 946 t ORIGIN 1 gggacgatgt ggggcagcga tcgcctggcg ggtgctgggg gaggcggggc ggcagtgact 61 gtggccttca ccaacgctcg cgactgcttc ctccacctgc cgcggcgtct cgtggcccag 121 ctgcatctgc tgcagaatca agctatagaa gtggtctgga gtcaccagcc tgcattcttg 181 agctgggtgg aaggcaggca ttttagtgat caaggtgaaa atgtggctga aattaacaga 241 cgagttggtc aaaaacttgg actctcaaat gggggacaga ttccagatga cctgaggaag 301 agactaaata tagaaatgca tgccgtagtc aggataactc cagtggaagt tacccctaaa 361 attccaagat ctctaaagtt acaacctaga gagaatttac ctaaagacat aagtgaagaa 421 gacataaaaa ctgtatttta ttcatggcta cagcagtcta ctaccaccat gcttcctttg 481 gtaatatcag aggaagaatt tattaagctg gaaactaaag atggactgaa ggaattttct 541 ctgagtatag ttcattcttg ggaaaaagaa aaagataaaa atatttttct gttgagtccc 601 aatttgctgc agaagactac aatacaagtc cttctagatc ctatggtaaa agaagaaaac 661 agtgaggaaa ttgactttat tcttcctttt ttaaagctga gctctttggg aggagtgaat 721 tccttaggcg tatcctcctt ggagcacatc actcacagcc tcctgggacg ccctttgtct 781 cggcagctga tgtctcttgt tgcaggactt aggaatggag ctcttttact cacaggagga 841 aagggaagtg gaaaatcaac tttagccaaa gcaatctgta aagaagcatt tgacaaactg 901 gatgcccatg tggagagagt tgactgtaaa gctttacgag gaaaaaggct tgaaaacata 961 caaaaaaccc tagaggtggc tttctcagag gcagtgtgga tgcagccatc tgttgtcctg 1021 ctggatgacc ttgacctcat tgctggactg cctgctgtcc cggaacatga gcacagtcct 1081 gatgcggtgc agagccagcg gcttgctcat gctttgaatg atatgataaa agagtttatc 1141 tccatgggaa gtttggttgc actgattgcc acaagtcagt ctcagcaatc tctacatcct 1201 ttacttgttt ctgctcaagg agttcacata tttcagtgcg tccaacacat tcagcctcct 1261 aatcaggaac aaagatgtga aattctgtgt aatgtaataa aaaataaatt ggactgtgat 1321 ataaacaagt tcaccgatct tgacctgcag catgtagcta aagaaactgg agggtttgtg 1381 gctagagatt ttacagtact tgtggatcga gccatacatt ctcgactctc tcgtcagagt 1441 atatccacca gagaaaaatt agttttaaca acattggact tccaaaaggc tctccgcgga 1501 tttcttcctg cgtctttgcg aagtgtcaac ctgcataaac ctagagacct gggttgggac 1561 aagattggtg ggttacatga agttaggcag atactcatgg atactatcca gttacctgcc 1621 aagtatccag aattatttgc aaacttgccc atacgacaaa gaacaggaat actgttgtat 1681 ggtccgcctg gaacaggaaa aaccttacta gctggggtaa ttgcacgagg gagtagaatg 1741 aattttataa gtgtcaaggg gccagagtta ctcagcaaat acattggagc aagtgaacaa 1801 gctgttcggg atatttttat tagagcacag gctgcaaagc cctgcattct tttctttgat 1861 gaatttgaat ccattgctcc tcggcggggt catgataata caggagttac agaccgagta 1921 gttaaccagt tgctgactca gttggatgga gtagaaggct tacagggtgt ttatgtattg 1981 gctgctacta gccgccctga cttgattgac cctgccctgc ttaggcctgg tcgactagat 2041 aaatgtgtat actgtcctcc tcctgatcag gtgtcacgtc ttgaaatttt aaatgtcctc 2101 agtgactctc tacctctggc agatgatgtt gaccttcagc atgtagcatc agtaactgac 2161 tcctttactg gagctgatct gaaagcttta ctttacaatg cccaattgga ggccttacat 2221 ggaatgctgc tctcgagtgg actccaggat ggaagttcca gctctgatag tgacctaagt 2281 ctgtcttcaa tggtctttct taaccatagc agtggctctg acgattcagc tggagatgga 2341 gaatgtggct tagatcagtc ccttgtttct ttagagatgt ccgagatcct tccagatgaa 2401 tcaaaattca atatgtaccg gctctacttt ggaagctctt atgaatcaga acttggaaat 2461 ggaacctctt ctgatttgag ctcacaatgt ctctctgcac caagctccat gactcaggat 2521 ttgcctggag ttcctgggaa agaccagttg ttttcacagc ctccagtgtt aaggacagct 2581 tcacaagagg gttgccaaga acttacacaa gaacaaagag atcaactgag ggcagatatc 2641 agtattatca aaggcagata ccggagccaa agtggagagg acgaatccat gaaccaacca 2701 ggaccaatca aaaccagact ggctattagt cagtcacatt taatgactgc acttggtcac 2761 acaagaccat ccattagtga agatgactgg aagaattttg ctgagctata tgaaagcttt 2821 caaaatccaa agaggagaaa aaatcaaagt ggaacaatgt ttcgacctgg acagaaagta 2881 actttagcat aaaatatact tctttttgat ttggttctgt taagtttttt gatggctttt 2941 ccatatgttg taacaggaaa aaaatggtgt ctatgaattt cttcttaatt taacaaattt 3001 ggttaattta taaaatcaca gattggtaaa tgctataatt atgtaatgat caggattgag 3061 attaatactg tagtataaat tgggacatta taacagattc catattttat ttcctaaaat 3121 ctaaattcag tctttaatga aataatatta gccaaatggt ggaactaatt tatttctttt 3181 gaggaaaaga taataaagaa tgtaattaaa tttaaatttc ttggaattcc cagttgtata 3241 ttcatcacct ttgtagcatt tgacaaattt tatgcttagc agcttcttca ctgttttgaa 3301 ataaaatatc ctattaccta ctgaaaaaaa aaaaaaaaaa aaaaaaa //