LOCUS AK294456 3114 bp mRNA linear HUM 31-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61093 partial cds, highly similar to Ubiquitously transcribed X chromosome tetratricopeptide repeat protein. ACCESSION AK294456 VERSION AK294456.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3114) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3114 /clone="BRAMY3008796" /clone_lib="BRAMY3" /db_xref="H-InvDB:HIT000489080" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="amygdala" CDS 25..>3114 /codon_start=1 /note="highly similar to Ubiquitously transcribed X chromosome tetratricopeptide repeat protein" /protein_id="BAG57692.1" /transl_table=1 /translation="MAAGKASGESEEASPSLTAEEREALGGLDSRLFGFVRFHEDGAR TKALLGKAVRCYESLILKAEGKVESDFFCQLGHFNLLLEDYPKALSAYQRYYSLQSDY WKNAAFLYGLGLVYFHYNAFQWAIKAFQEVLYVDPSFCRAKEIHLRLGLMFKVNTDYE SSLKHFQLALVDCNPCTLSNAEIQFHIAHLYETQRKYHSAKEAYEQLLQTENLSAQVK ATVLQQLGWMHHTVDLLGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRCYSSIGKV QDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDL GTLYESCNQPQDAIKCYLNATRSKSCSNTSALAARIKYLQACKPHHPNTEPVLGLSQT PISQQSLPLHMIPSSQVDDLSSPAKRKRTSSPTKNTSDNWSGGHAVSHPPVQQQAHSW CLTPQKLQHLEQLRANRNNLNPAQKLMLEQLESQFVLMQQHQMRPTGVAQVRSTGIPN GPTADSSLPTNSVSGQQPQLALTRVPSVSQPGVRPACPGQPLANGPFSAGHVPCSTSR TLGSTDTILIGNNHITGSGSNGNVPYLQRNALTLPHNRTNLTSSAEEPWKNQLSNSTQ GLHKGQSSHSAGPNGERPLSSTGPSQHLQAAGSGIQNQNGHPTLPSNSVTQGAALNHL SSHTATSGGQQGITLTKESKPSGNILKVPETSRHTGETPNSTASVEGLPNHVHQMTAD AVCSPSHGDSKSPGLLSSDNPQLSALLMGKANNNVGTGTCDKVNNIHPAVHTKTDNSV ASSPSSAISTATPSPKSTEQTTTNSVTSLNSPHSGLHTINGEGMEESQSPMKTDLLLV NHKPSPQIIPSMSVSIYPSSAEVLKACRNLGKNGLSNSSILLDKCPPPRPPSSPYPPL PKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTVIRGLAGALKLDLGLFSTKTL VEANNEHMVEVRTQLLQPADENWDPTGTKKIWHCESNRSHTTIAKYAQYQASSFQESL " BASE COUNT 927 a 763 c 653 g 771 t ORIGIN 1 gctttcggtg atgaggaaaa gaaaatggcg gcgggaaaag cgagcggcga gagcgaggag 61 gcgtccccca gcctgacagc cgaggagagg gaggcgctcg gcggactgga cagccgcctc 121 tttgggttcg tgagatttca tgaagatggc gccaggacga aggccctact gggcaaggct 181 gttcgctgct atgaatctct aatcttaaaa gctgaaggaa aagtggagtc tgatttcttt 241 tgtcaattag gtcacttcaa cctcttattg gaagattatc caaaagcatt atctgcatac 301 cagaggtact acagtttaca gtctgactac tggaagaatg ctgccttttt atatggtctt 361 ggtttggtct acttccatta taatgcattt cagtgggcaa ttaaagcatt tcaggaggtg 421 ctttatgttg atcccagctt ttgtcgagcc aaggaaattc atttacgact tgggcttatg 481 ttcaaagtga acacagacta tgagtctagt ttaaagcatt ttcagttagc tttggttgac 541 tgtaatccct gcactttgtc caatgctgaa attcaatttc acattgccca cttatatgaa 601 acccagagga aatatcattc tgcaaaagaa gcttatgaac aacttttgca gacagagaat 661 ctttctgcac aagtaaaagc aactgtctta caacagttag gttggatgca tcacactgta 721 gatctcctgg gagataaagc caccaaggaa agctatgcta ttcagtatct ccaaaagtcc 781 ttggaagcag atcctaattc tggccagtcc tggtatttcc tcggaaggtg ctattcaagt 841 attgggaaag ttcaggatgc ctttatatct tacaggcagt ctattgataa atcagaagca 901 agtgcagata catggtgttc aataggtgtg ctatatcagc agcaaaatca gcccatggat 961 gctttacagg cctatatttg tgctgtacaa ttggaccatg gccatgctgc agcctggatg 1021 gacctaggca ctctctatga atcctgcaac cagcctcagg atgccattaa atgctactta 1081 aatgcaacta gaagcaaaag ttgtagtaat acctctgcac ttgcagcacg aattaagtat 1141 ttacaggcat gtaaacctca tcatccaaat actgaacctg tattaggcct cagtcaaaca 1201 ccaatttcac agcaatcctt gccactacac atgattcctt ctagccaagt agatgacctg 1261 tccagtcctg ccaagaggaa aagaacatct agtccaacaa agaatacttc tgacaattgg 1321 agtggtggac atgctgtgtc acatcctcca gtacagcaac aagctcattc atggtgtttg 1381 acaccacaga aattacagca tttggaacag ctccgcgcaa atagaaataa tttaaatcca 1441 gcacagaaac tgatgctgga acagctggaa agtcagtttg tcttaatgca acaacaccaa 1501 atgagaccaa caggagttgc acaggtacga tctactggaa ttcctaatgg gccaacagct 1561 gactcatcac tgcctacaaa ctcagtctct ggccagcagc cacagcttgc tctgaccaga 1621 gtgcctagcg tctctcagcc tggagtccgt cctgcctgcc ctgggcagcc tttggccaat 1681 ggaccctttt ctgcaggcca tgttccctgt agcacatcaa gaacgctggg aagtacagac 1741 actattttga taggcaataa tcatataaca ggaagtggaa gtaatggaaa cgtgccttac 1801 ctgcagcgaa acgcactcac tctacctcat aaccgcacaa acctgaccag cagcgcagag 1861 gagccgtgga aaaaccaact atctaactcc actcaggggc ttcacaaagg tcagagttca 1921 cattcggcag gtcctaatgg tgaacgacct ctctcttcca ctgggccttc ccagcatctc 1981 caggcagctg gctctggtat tcagaatcag aacggacatc ccaccctgcc tagcaattca 2041 gtaacacagg gggctgctct caatcacctc tcctctcaca ctgctacctc aggtggacaa 2101 caaggcatta ccttaaccaa agagagcaag ccttcaggaa acatattgaa ggtgcctgaa 2161 acaagcaggc acactggaga gacacctaac agcactgcca gtgtcgaggg acttcctaat 2221 catgtccatc agatgacggc agatgctgtt tgcagtccta gccatggaga ttctaagtca 2281 ccaggtttac taagttcaga caatcctcag ctctctgcct tgttgatggg aaaagccaat 2341 aacaatgtgg gtactggaac ctgtgacaaa gtcaataaca tccacccagc tgttcataca 2401 aagactgata actctgttgc ctcttcacca tcttcagcca tttcaacagc aacaccttct 2461 ccaaaatcca ctgagcagac aaccacaaac agtgttacca gccttaacag ccctcacagt 2521 gggctacaca caattaatgg agaagggatg gaagaatctc agagccccat gaaaacagat 2581 ctgcttctgg ttaaccacaa acctagtcca cagatcatac catcaatgtc tgtgtccata 2641 taccccagct cagcagaagt tctgaaggca tgcaggaatc taggtaaaaa tggcttatct 2701 aacagtagca ttttgttgga taaatgtcca cctccaagac caccatcttc accataccct 2761 cccttgccaa aggacaagtt gaatccacct acacctagta tttacttgga aaataaacgt 2821 gatgctttct ttcctccatt acatcaattt tgtacaaatc cgaacaaccc tgttacagta 2881 atacgtggcc ttgctggagc tcttaagtta gacctgggac ttttctctac taaaactttg 2941 gtggaagcta acaatgaaca tatggtagaa gtgaggacac agttgttgca gccagcagat 3001 gaaaactggg atcccactgg aacaaagaaa atctggcatt gtgaaagtaa tagatctcat 3061 actacaattg ctaaatatgc acagtaccag gcctcctcat tccaggaatc attg //