LOCUS AK292955 4284 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ77248 complete cds, highly similar to Homo sapiens peroxisome biogenesis factor 1 (PEX1), mRNA. ACCESSION AK292955 VERSION AK292955.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4284) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4284 /clone="TRACH3024624" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000425752" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 2..3853 /codon_start=1 /note="highly similar to Homo sapiens peroxisome biogenesis factor 1 (PEX1), mRNA" /protein_id="BAF85644.1" /transl_table=1 /translation="MWGSDRLAGAGGGGAAVTVAFTNARDCFLHLPRRLVAQLHLLQN QAIEVVWSHQPAFLSWVEGRHFSDQGENVAEINRQVGQKLGLSNGGQVFLKPCSHVVS CQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQTYIFIQIVAL IPAASYGRLETDTKLLIQPKTRRAKENTFSKADAEYKKLHSYGRDQKGMMKELQTKQL QSNTVGITESNENESEIPVDSSSVASLWTMIGSIFSFQSEKKQETSWGLTEINAFKNM QSKVVPLDNIFRVCKSQPPSIYNASATSVFHKHCAIHVFPWDQEYFDVEPSFTVTYGK LVKLLSPKQQQSKTKQNVLSPEKEKQMSEPLDQKKIRSDHNEEDEKACVLQVVWNGLE ELNNAIKYTKNVEVLHLGKVWIPDDLRKRLNIEMHAVVRITPVEVTPKIPRSLKLQPR ENLPKDISEEDIKTVFYSWLQQSTTTMLPLVISEEEFIKLETKDGLKEFSLSIVHSWE KEKDKNIFLLSPNLLQKTTIQVLLDPMVKEENSEEIDFILPFLKLSSLGGVNSLGVSS LEHITHSLLGRPLSRQLMSLVAGLRNGALLLTGGKGSGKSTLAKAICKEAFDKLDAHV ERVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDA VQSQRLAHALNDMMKEFISMGSLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPP NQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSR QSISTREKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTI QLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKY IGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVE GLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDV DLQHVASVTDSFTGADLKALLYNAQLEALHGMLLSSGLQDGSSSSDSDLSLSSMVFLN HSSGSDDSAGDGECGLDQSLVSLEMSEILPDESKFNMYRLYFGSSYESELGNGTSSDL SSQCLSAPSSMTQDLPGVPGKDQLFSQPPVLRTASQEGCQELTQEQRDQLRADISIIK GRYRSQSGEDESMNQPGPIKTRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQN PKRRKNQSGTMFRPGQKVTLA" BASE COUNT 1321 a 832 c 924 g 1207 t ORIGIN 1 gatgtggggc agcgatcgcc tggcgggtgc tgggggaggc ggggcggcag tgactgtggc 61 cttcaccaac gctcgcgact gcttcctcca cctgccgcgg cgtctcgtgg cccagctgca 121 tctgctgcag aatcaagcta tagaagtggt ctggagtcac cagcctgcat tcttgagctg 181 ggtggaaggc aggcatttta gtgatcaagg tgaaaatgtg gctgaaatta acagacaagt 241 tggtcaaaaa cttggactct caaatggggg acaggtattt ctcaagccat gttcccatgt 301 ggtatcttgt caacaagttg aggtggaacc cctctcagca gatgattggg agatactgga 361 gctgcatgct gtttcccttg aacaacatct tctagatcaa attcgaatag tttttccaaa 421 agccattttt cctgtttggg ttgatcaaca aacgtacata tttatccaaa ttgttgcact 481 aataccagct gcctcttatg gaaggctgga aactgacacc aaactcctta ttcagccaaa 541 gacacgccga gccaaagaga atacattttc aaaagctgat gctgaatata aaaaacttca 601 tagttatgga agagaccaga aaggaatgat gaaagaactt caaaccaagc aacttcagtc 661 aaatactgtg ggaatcactg aatctaatga aaacgagtca gagattccag ttgactcatc 721 atcagtagca agtttatgga ctatgatagg aagcattttt tcctttcaat ctgagaagaa 781 acaagagaca tcttggggtt taactgaaat caatgcattc aaaaatatgc agtcaaaggt 841 tgttcctcta gacaatattt tcagagtatg caaatctcaa cctcctagta tatataacgc 901 gtcagcaacc tctgtttttc ataaacactg tgccattcat gtatttccat gggaccagga 961 atattttgat gtagagccca gctttactgt gacatatgga aagctagtta agctactttc 1021 tccaaagcaa cagcaaagta aaacaaaaca aaatgtgtta tcacctgaaa aagagaagca 1081 gatgtcagag ccactagatc aaaaaaaaat taggtcagat cataatgaag aagatgagaa 1141 ggcctgtgtg ctacaagtag tctggaatgg acttgaagaa ttgaacaatg ccatcaaata 1201 taccaaaaat gtagaagttc tccatcttgg gaaagtctgg attccagatg acctgaggaa 1261 gagactaaat atagaaatgc atgccgtagt caggataact ccagtggaag ttacccctaa 1321 aattccaaga tctctaaagt tacaacctag agagaattta cctaaagaca taagtgaaga 1381 agacataaaa actgtatttt attcatggct acagcagtct actaccacca tgcttccttt 1441 ggtaatatca gaggaagaat ttattaagct ggaaactaaa gatggactga aggaattttc 1501 tctgagtata gttcattctt gggaaaaaga aaaagataaa aatatttttc tgttgagtcc 1561 caatttgctg cagaagacta caatacaagt ccttctagat cctatggtaa aagaagaaaa 1621 cagtgaggaa attgacttta ttcttccttt tttgaagctg agctctttgg gaggagtgaa 1681 ttccttaggc gtatcctcct tggagcacat cactcacagc ctcctgggac gccctttgtc 1741 tcggcagctg atgtctcttg ttgcaggact taggaatgga gctcttttac tcacaggagg 1801 aaagggaagt ggaaaatcaa ctttagccaa agcaatctgt aaagaagcat ttgacaaact 1861 ggatgcccat gtggagagag ttgactgtaa agctttacga ggaaaaaggc ttgaaaacat 1921 acaaaaaacc ctagaggtgg ctttctcaga ggcagtgtgg atgcagccat ctgttgtcct 1981 gctggatgac cttgacctca ttgctggact gcctgctgtc ccggaacatg agcacagtcc 2041 tgatgcggtg cagagccagc ggcttgctca tgctttgaat gatatgatga aagagtttat 2101 ctccatggga agtttggttg cactgattgc cacaagtcag tctcagcaat ctctacatcc 2161 tttacttgtt tctgctcaag gagttcacat atttcagtgc gtccaacaca ttcagcctcc 2221 taatcaggaa caaagatgtg aaattctgtg taatgtaata aaaaataaat tggactgtga 2281 tataaacaag ttcaccgatc ttgacctgca gcatgtagct aaagaaactg gagggtttgt 2341 ggctagagat tttacagtac ttgtggatcg agccatacat tctcgactct ctcgtcagag 2401 tatatccacc agagaaaaat tagttttaac aacattggac ttccaaaagg ctctccgcgg 2461 atttcttcct gcgtctttgc gaagtgtcaa cctgcataaa cctagagacc tgggttggga 2521 caagattggt gggttacatg aagttaggca gatactcatg gatactatcc agttacctgc 2581 caagtatcca gaattatttg caaacttgcc catacgacaa agaacaggaa tactgttgta 2641 tggtccgcct ggaacaggaa aaaccttact agctggggta attgcacgag agagtagaat 2701 gaattttata agtgtcaagg ggccagagtt actcagcaaa tacattggag caagtgaaca 2761 agctgttcgg gatattttta ttagagcaca ggctgcaaag ccctgcattc ttttctttga 2821 tgaatttgaa tccattgctc ctcggcgggg tcatgataat acaggagtta cagaccgagt 2881 agttaaccag ttgctgactc agttggatgg agtagaaggc ttacagggtg tttatgtatt 2941 ggctgctact agtcgccctg acttgattga ccctgccctg cttaggcctg gtcgactaga 3001 taaatgtgta tactgtcctc ctcctgatca ggtgtcacgt cttgaaattt taaatgtcct 3061 cagtgactct ctacctctgg cagatgatgt tgaccttcag catgtagcat cagtaactga 3121 ctcctttact ggagctgatc tgaaagcttt actttacaat gcccaattgg aggccttaca 3181 tggaatgctg ctctcgagtg gactccagga tggaagttcc agctctgata gtgacctaag 3241 tctgtcttca atggtctttc ttaaccatag cagtggctct gacgattcag ctggagatgg 3301 agaatgtggc ttagatcagt cccttgtttc tttagagatg tccgagatcc ttccagatga 3361 atcaaaattc aatatgtacc ggctctactt tggaagctct tatgaatcag aacttggaaa 3421 tggaacctct tctgatttga gctcacaatg tctctctgca ccaagctcca tgactcagga 3481 tttgcctgga gttcctggga aagaccagtt gttttcacag cctccagtgt taaggacagc 3541 ttcacaagag ggttgccaag aacttacaca agaacaaaga gatcaactga gggcagatat 3601 cagtattatc aaaggcagat accggagcca aagtggagag gacgaatcca tgaaccaacc 3661 aggaccaatc aaaaccagac tggctattag tcagtcacat ttaatgactg cacttggtca 3721 cacaagacca tccattagtg aagatgactg gaagaatttt gctgagctat atgaaagctt 3781 tcaaaatcca aagaggagaa aaaatcaaag tggaacaatg tttcgacctg gacagaaagt 3841 aactttagca taaaatatac ttctttttga tttggttctg ttaagttttt tgatggcttt 3901 tccatatgtt gtaacaggaa aaaaatggtg tctatgaatt tcttcttaat ttaacaaatt 3961 tggttaattt ataaaatcac agattggtaa atgctataat tatgtaatga tcaggattga 4021 gattaatact gtagtataaa ttgggacatt ataacagatt ccatatttta tttcctaaaa 4081 tctaaattca gtctttaatg aaataatatt agccaaatgg tggaactaat ttatttcttt 4141 tgaggaaaag ataataaaga atgtaattaa atttaaattt cttggaattc ccagttgtat 4201 attcatcacc tttgtagcat ttgacaaatt ttatgcttag cagcttcttc actgttttga 4261 aataaaatat cctattacct actg //