LOCUS AK292892 2913 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ78605 complete cds, highly similar to Homo sapiens 3-hydroxy-3-methylglutaryl-Coenzyme A reductase (HMGCR), mRNA. ACCESSION AK292892 VERSION AK292892.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2913) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2913 /clone="TRACH3015712" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000425689" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 88..2754 /codon_start=1 /note="highly similar to Homo sapiens 3-hydroxy-3-methylglutaryl-Coenzyme A reductase (HMGCR), mRNA" /protein_id="BAF85581.1" /transl_table=1 /translation="MLSRLFRMHGLFVASHPWEVIVGTVTLTICMMSMNMFTGNNKIC GWNYECPKFEEDVLSSDIIILTITRCIAILYIYFQFQNLRQLGSKYILGIAGLFTIFS SFVFSTVVIHFLDKELTGLNEALPFFLLLIDLSRASTLAKFALSSNSQDEVRENIARG MAILGPTFTLDALVECLVIGVGTMSGVRQLEIMCCFGCMSVLANYFVFMTFFPACVSL VLELSRESREGRPIWQLSHFARVLEEEENKPNPVTQRVKMIMSLGLVLVHAHSRWIAD PSPQNSTADTSKVSLGLDENVSKRIEPSVSLWQFYLSKMISMDIEQVITLSLALLLAV KYIFFEQTETESTLSLKNPITSPVVTQKKVPDNCCRREPMLVRNNQKCDSVEEETGIN RERKVEVIKPLVAETDTPNRATFVVGNSSLLVTSSVLVTQEPEIELPREPRPNEECLQ ILGNAEKGAKFLSDAEIIQLVNAKHIPAYKLETLMETHERGVSIRRQLLSKKLSEPSS LQYLPYRDYNYSLVMGACCENVIGYMPIPVGVAGPLCLDEKEFQVPMATTEGCLVAST NRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETSEGFAVIKEAFDS TSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEKALSKLHEYFPEMQILA VSGNYCTDKKPAAINWIEGRGKSVVCEAVIPAKVVREVLKTTTEAMIEVNINKNLVGS AMAGSIGGYNAHAANIVTAIYIACGQDAAQNVGSSNCITLMEASGPTNEDLYISCTMP SIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLARIVCGTVMAGELSLMAA LAAGHLVKSHMIHNRSKINLQDLQGACTKKTA" BASE COUNT 821 a 599 c 690 g 803 t ORIGIN 1 gcgttaactg gagccaggct gagcgtcggc gccggggttc ggtggcctct agtgagatct 61 ggaggatcca aggattctgt agctacaatg ttgtcaagac tttttcgaat gcatggcctc 121 tttgtggcct cccatccctg ggaagtcata gtggggacag tgacactgac catctgcatg 181 atgtccatga acatgtttac tggtaacaat aagatctgtg gctggaatta tgaatgtcca 241 aagtttgaag aggatgtttt gagcagtgac attataattc tgacaataac acgatgcata 301 gccatcctgt atatttactt ccagttccag aatttacgtc aacttggatc aaaatatatt 361 ttgggtattg ctggcctttt cacaattttc tcaagttttg tattcagtac agttgtcatt 421 cacttcttag acaaagaatt gacaggcttg aatgaagctt tgcccttttt cctacttttg 481 attgaccttt ccagagcaag cacattagca aagtttgccc tcagttccaa ctcacaggat 541 gaagtaaggg aaaatattgc tcgtggaatg gcaattttag gtcctacgtt taccctcgat 601 gctcttgttg aatgtcttgt gattggagtt ggtaccatgt caggggtacg tcagcttgaa 661 attatgtgct gctttggctg catgtcagtt cttgccaact acttcgtgtt catgactttc 721 ttcccagctt gtgtgtcctt ggtattagag ctttctcggg aaagccgcga gggtcgtcca 781 atttggcagc tcagccattt tgcccgagtt ttagaagaag aagaaaataa gccgaatcct 841 gtaactcaga gggtcaagat gattatgtct ctaggcttgg ttcttgttca tgctcacagt 901 cgctggatag ctgatccttc tcctcaaaac agtacagcag atacttctaa ggtttcatta 961 ggactggatg aaaatgtgtc caagagaatt gaaccaagtg tttccctctg gcagttttat 1021 ctctctaaaa tgatcagcat ggatattgaa caagttatta ccctaagttt agctctcctt 1081 ctggctgtca agtacatctt ctttgaacaa acagagacag aatctacact ctcattaaaa 1141 aaccctatca catctcctgt agtgacacaa aagaaagtcc cagacaattg ttgtagacgt 1201 gaacctatgc tggtcagaaa taaccagaaa tgtgattcag tagaggaaga gacagggata 1261 aaccgagaaa gaaaagttga ggttataaaa cccttagtgg ctgaaacaga taccccaaac 1321 agagctacat ttgtggttgg taactcctcc ttactcgtta cttcatcagt actggtgaca 1381 caggaacctg aaattgaact tcccagggaa cctcggccta atgaagaatg tctacagata 1441 cttgggaatg cagagaaagg tgcaaaattc cttagtgatg ctgagatcat ccagttagtc 1501 aatgctaagc atatcccagc ctacaagttg gaaactctga tggaaactca tgagcgtggt 1561 gtatctattc gccgacagtt actttccaag aagctttcag aaccttcttc tctccagtac 1621 ctaccttaca gggattataa ttactccttg gtgatgggag cttgttgtga gaatgttatt 1681 ggatatatgc ccatccctgt tggagtggca ggaccccttt gcttagatga aaaagaattt 1741 caggttccaa tggcaacaac agaaggttgt cttgtggcca gcaccaatag aggctgcaga 1801 gcaataggtc ttggtggagg tgccagcagc cgagtccttg cagatgggat gactcgtggc 1861 ccagttgtgc gtcttccacg tgcttgtgac tctgcagaag tgaaagcctg gctcgaaaca 1921 tctgaagggt tcgcagtgat aaaggaggca tttgacagca ctagcagatt tgcacgtcta 1981 cagaaacttc atacaagtat agctggacgc aacctttata tccgtttcca gtccaggtca 2041 ggggatgcca tggggatgaa catgatttca aagggtacag agaaagcact ttcaaaactt 2101 cacgagtatt tccctgaaat gcagattcta gccgttagtg gtaactattg tactgacaag 2161 aaacctgctg ctataaattg gatagaggga agaggaaaat ctgttgtttg tgaagctgtc 2221 attccagcca aggttgtcag agaagtatta aagactacca cagaggctat gattgaggtc 2281 aacattaaca agaatttagt gggctctgcc atggctggga gcataggagg ctacaacgcc 2341 catgcagcaa acattgtcac cgccatctac attgcctgtg gacaggatgc agcacagaat 2401 gttggtagtt caaactgtat tactttaatg gaagcaagtg gtcccacaaa tgaagattta 2461 tatatcagct gcaccatgcc atctatagag ataggaacgg tgggtggtgg gaccaaccta 2521 ctacctcagc aagcctgttt gcagatgcta ggtgttcaag gagcatgcaa agataatcct 2581 ggggaaaatg cccggcagct tgcccgaatt gtgtgtggga ccgtaatggc tggggaattg 2641 tcacttatgg cagcattggc agcaggacat cttgtcaaaa gtcacatgat tcacaacagg 2701 tcgaagatca atttacaaga cctccaagga gcttgcacca agaagacagc ctgaatagcc 2761 caacagttct gaactggaac atgggcattg ggttctaaag gactaacata aaatctgtga 2821 attaaaaaag ctcaatgcat tgtcttgtgg aggatgaata gatgtgatca ctgagacagc 2881 cacttggttt ttggctcttt cagagaggtc tca //