LOCUS AK292162 1098 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ78189 complete cds, highly similar to Homo sapiens triggering receptor expressed on myeloid cells 1 (TREM1), mRNA. ACCESSION AK292162 VERSION AK292162.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1098) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1098 /clone="SYNOV4006729" /clone_lib="SYNOV4" /db_xref="H-InvDB:HIT000424959" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="synovial membrane tissue from rheumatoid arthritis" CDS 28..732 /codon_start=1 /note="highly similar to Homo sapiens triggering receptor expressed on myeloid cells 1 (TREM1), mRNA" /protein_id="BAF84851.1" /transl_table=1 /translation="MRKTRLWGLLWMLFVSELRAATKLTEEKYELKEGQTLDVKRDYT LEKFASSQKAWQIIRDGEMPKTLARTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVN LQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKGFSGTPGSNENSTQNVYKIPPTTTK ALCPLYTSPRTVTQAPPKSTADVSTPDSEINLTNVTDIIRVPVFNIVILLAGGFLSKS LVFSVLFAVTLRSFVP" BASE COUNT 279 a 284 c 267 g 268 t ORIGIN 1 agcagttgga gctggtgcac aggaaggatg aggaagacca ggctctgggg gctgctgtgg 61 atgctctttg tctcagaact ccgagctgca actaaattaa ctgaggaaaa gtatgaactg 121 aaagaggggc agaccctgga tgtgaaacgt gactacacgc tagagaagtt tgccagcagc 181 cagaaagctt ggcagataat aagggacgga gagatgccca agaccctggc acgcacagag 241 aggccttcaa agaattccca tccagtccaa gtggggagga tcatactaga agactaccat 301 gatcatggtt tactgcgcgt ccgaatggtc aaccttcaag tggaagattc tggactgtat 361 cagtgtgtga tctaccagcc tcccaaggag cctcacatgc tgttcgatcg catccgcttg 421 gtggtgacca agggtttttc agggacccct ggctccaatg agaattctac ccagaatgtg 481 tataagattc ctcctaccac cactaaggcc ttgtgcccac tctataccag ccccagaact 541 gtgacccaag ctccacccaa gtcaactgcc gatgtctcca ctcctgactc tgaaatcaac 601 cttacaaatg tgacagatat catcagggtt ccggtgttca acattgtcat tctcctggct 661 ggtggattcc tgagtaagag cctggtcttc tctgtcctgt ttgctgtcac gctgaggtca 721 tttgtaccct aggcccacga acccacgaga atgtcctctg acttccagcc acatccatct 781 ggcagttgtg ccaagggagg agggaggagg taaaaggcag ggagttaata acatgaatta 841 aatctgtaat caccagctat ttctaaagtc agcgtctcac cttcctgccc actgccctcg 901 ttcctctaat aatcttgggt gggcatttgt gcctcagaaa agaagttaca gccccaaaca 961 tgcttggtcc ttcattccac cagccacttg gggttggcat gaaatacaga cagttcaatg 1021 cttttcaccg taattctctt gtgggggctg tgacatgcag aaggcacacc tgatactttt 1081 cctgctcagt tttgccct //