LOCUS AK098007 2026 bp mRNA linear HUM 03-JUL-2008 DEFINITION Homo sapiens cDNA FLJ40688 fis, clone THYMU2024185, highly similar to HLA class II histocompatibility antigen, DX beta chain precursor. ACCESSION AK098007 VERSION AK098007.1 KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence). SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2026) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Helix Research Institute, Genomics Laboratory; 1532-3 Yana, Kisarazu, Chiba 292-0812, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R., Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H., Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T., Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y., Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M., Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H., Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T., Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H., Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M., Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S., Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K., Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K., Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y., Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S., Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O., Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F., Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M., Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S., Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A., Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M., Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H., Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S., Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y., Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H., Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y., Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N., Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T., Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S. TITLE Complete sequencing and characterization of 21,243 full-length human cDNAs JOURNAL Nat. Genet. 36, 40-45 (2004) REFERENCE 3 AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S., Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2002) COMMENT NEDO human cDNA sequencing project supported by Ministry of Economy, Trade and Industry of Japan; cDNA full insert sequencing: Research Association for Biotechnology (RAB); cDNA library construction: Helix Research Institute (HRI) (supported by Japan Key Technology Center etc.); 5'- & 3'-end one pass sequencing: RAB, HRI, and Biotechnology Center, National Institute of Technology and Evaluation; clone selection for full insert sequencing: HRI and RAB; annotation: HRI and RAB. FEATURES Location/Qualifiers source 1..2026 /clone="THYMU2024185" /clone_lib="THYMU2" /db_xref="H-InvDB:HIT000022861_03" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thymus" CDS 63..890 /codon_start=1 /note="highly similar to HLA class II histocompatibility antigen, DX beta chain precursor" /protein_id="BAG53563.1" /translation="MALQIPGGFWAAAVTVMLVMLSTPVAEARDFPKDFLVQFKGMCY FTNGTERVRGVARYIYNREEYGRFDSDVGEFQAVTELGRSIEDWNNYKDFLEQERAAV DKVCRHNYEAELRTTLQRQVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFR NDQEETAGVVSTSLIRNGDWTFQILVMLEITPQRGDIYTCQVEHPSLQSPITVEWRAQ SESAQSKMLSGIGGFVLGLIFLGLGLIIRHRGQKGPRGPPPAGNISAMIQSGERAQA" BASE COUNT 469 a 522 c 550 g 485 t ORIGIN 1 attaggtttg agctgtgttg actaccactg ctttttcctt ggtctcactt acgtcttgga 61 agatggctct gcagatccct ggaggctttt gggcagcagc tgtgaccgtg atgctggtga 121 tgctgagcac cccagtggct gaggccagag actttcccaa ggatttcttg gtccagttta 181 agggcatgtg ctacttcacc aacgggacag agcgcgtgcg cggtgtggcc agatacatct 241 ataaccgcga ggagtacggg cgcttcgaca gcgacgttgg ggagttccag gcggtgaccg 301 agctggggcg gagcatcgag gactggaaca actataagga cttcttggag caggagcggg 361 ccgcggtgga caaggtgtgc agacacaact acgaggcgga gctgcgcacg accttgcagc 421 ggcaagtgga gcccacagtg accatctccc catccaggac agaggccctc aaccaccaca 481 acctgctggt ctgctcagtg acagatttct atccagccca gatcaaagtc cggtggtttc 541 ggaatgacca ggaggagaca gccggtgttg tgtccacctc cctcattagg aatggtgact 601 ggaccttcca gattctggtg atgctggaaa taactcccca gcgtggagac atctacacct 661 gccaagtgga gcaccccagc ctccagagcc ccatcaccgt ggagtggcgg gctcagtctg 721 aatctgccca gagcaagatg ctgagtggca ttggaggctt cgtgctgggg ctgatcttcc 781 tcgggctggg ccttatcatc cgtcacaggg gtcagaaagg acctcgaggg cctccaccag 841 caggtaatat ttcagccatg atccagtcag gggagagggc acaggcataa gagggaagag 901 ccatggtgaa accgcatctc tactaaaaat acaaaaatta gctggacgtg gtggtgtgca 961 tctgtaatcc cggctacttg ggaggttgag gcaagagaat cacttgaacc caggaggcag 1021 aggttgcagt gagccaagat ggcgccactg cactccagtc tgggcgatag agctagagtc 1081 tgtctcaaaa aaaaaaaaag aagagcatga gcggagtgtt ccagggcaca gtggtctctg 1141 ttcatggcct gtttgctgct atgagggtta agacttaggg gaaaagtttg ccagtttcta 1201 cgaatctcca gagattgttt cctagaacca ggccttaact ttggtggcat ctttttgtga 1261 aatgtgggga cagagccaca tcttgaatgt gagatagtag ggtgatgccc actttgtgcc 1321 acattttgtt agctactgcc tgtaggcatt ttcagtgact aaaagaggct gctagtggtg 1381 gagatgaagt gtcacccaat ttactaaaaa aatcaaactc ttcatattac ccagaagggt 1441 aactgctgtt cccccacctc cacatatctg catcaagctg aagttctgtg tcctcatgag 1501 ctgattttac ctttacacag atattgggga acgtgatgat gatatgccct ggacctcagc 1561 atcctctgtt tgatgctaca gagggaactg aggactaggg gagagggtgt gtccctcagg 1621 gtaccctgtg ctgatcatgc ctcgtctctc ttctccagga ctcccgcact gactcctgag 1681 gacttttgtc tgggattggt catcactctt ctgtaatgcc cacctgcccc tgcccagaat 1741 tcctagctgc ctgtgtcacc ctgtcccact gaggtcagag tcctacagtg gctcatgcag 1801 ccacaggtca ccttctgtga tccccatccc aaggcactgg tggtgactct gcttcctgca 1861 ctgacccaga gcctctgcct gtgcactgca agctgtgtct actcaggccc caaggggcat 1921 ctctgtttcc attctccccc cacagacctg tcaagagaag catgacaaac aaaatcattt 1981 acctgacttt agtgcttttt cccataatta aacctgattc tgagtt //