LOCUS AK022967 3080 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ12905 fis, clone NT2RP2004366, weakly similar to VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13. ACCESSION AK022967 VERSION AK022967.1 KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence). SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3080) AUTHORS Isogai,T. and Otsuki,T. TITLE Direct Submission JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Helix Research Institute, Genomics Laboratory; 1532-3 Yana, Kisarazu, Chiba 292-0812, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R., Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H., Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T., Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y., Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M., Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H., Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T., Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H., Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M., Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S., Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K., Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K., Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y., Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S., Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O., Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F., Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M., Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S., Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A., Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M., Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H., Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S., Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y., Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H., Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y., Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N., Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T., Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S. TITLE Complete sequencing and characterization of 21,243 full-length human cDNAs JOURNAL Nat. Genet. 36, 40-45 (2004) REFERENCE 3 AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y., Nishikawa,T., Nagai,K., Sugano,S., Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K., Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and Oshima,A. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2000) COMMENT NEDO human cDNA sequencing project supported by Ministry of International Trade and Industry of Japan; cDNA full insert sequencing: Research Association for Biotechnology; cDNA library construction, 5'- & 3'-end one pass sequencing and clone selection: Helix Research Institute (supported by Japan Key Technology Center etc.) and Department of Virology, Institute of Medical Science, University of Tokyo. FEATURES Location/Qualifiers source 1..3080 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RP2004366" /clone_lib="NT2RP2" /db_xref="H-InvDB:HIT000006241" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells after 2-weeks retinoic acid (RA) induction." /organism="Homo sapiens" CDS 16..2943 /codon_start=1 /protein_id="BAB14337.1" /translation="MTYNTGQTVVAFHSPYWMVNKTGRMLQYKADGIHRKHPPNYKKP VLFSFQPNHFFNNNKVQLMVTDSELSNQFSIDTVGSHEAVKCKGLKMDYQVGVTIDLS SFNITRIVTFTPFYMIKNKSKYHISVAEEGNDKWLSLDLEQCIPFWPEYASSKLLIQV ERSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHSTVITFLDYHDGAARFLLI NHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKWRCRKSHGEVTQKDDM MMPIDLGEKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQEIAVALQDVGI SLVNNYTKQEVAYIGITSSDVVWETKPKKKARWEPMSVKHTEKLEREFKEYTESSPSE DKVIQLDTNVPVRLTPTGHNMKILQPHVIALRRNYLPALKVEYNTSAHQSSFRIQIYR IQIQNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKVL IQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQSQVSL YEYFHISPIKLHLSVSLSSGREEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQDVVF KLAFFELNYQFHTTSDLQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVE AFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDE DYQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFFKG VGKGLVGAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRD GTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITRRGVLFVTKGTFGQLTCEWQYSF DEFTKEPFIVHGRRLRIEAKERVKSVFHAREFGKIINFKTPEDARWILTKLQEAREPS PSL" BASE COUNT 1019 a 532 c 667 g 862 t ORIGIN 1 gatattgctg tccatatgac ttacaatact ggtcagacag ttgtggcatt tcatagtcct 61 tattggatgg tcaataaaac tggccgcatg ttacagtaca aagcagacgg aattcatcga 121 aagcatccac ctaattataa aaagccagtt ctcttttctt ttcagccaaa tcactttttt 181 aataacaata aggttcaact tatggtaact gatagtgagt tgtccaatca gttttcaatt 241 gatactgttg gtagtcatga agctgttaaa tgtaaaggcc tgaaaatgga ctatcaagtt 301 ggtgtcacta tagacctgag cagttttaac attactagaa ttgtgacatt tacccctttt 361 tatatgatta aaaacaaaag caaataccat atatcagtgg ctgaagaagg aaatgataaa 421 tggctctctc ttgatttgga gcagtgtatc cccttttggc ctgagtatgc ttctagtaaa 481 cttcttattc aagtcgaaag gagtgaagat cctcccaaaa ggatatattt taacaagcag 541 gaaaattgta ttctattgcg tctagataac gagcttggag gtattatagc agaagtgaat 601 ttggccgagc attctacagt tattacattt ttagattatc atgatggagc agctagattc 661 ctcttaataa atcacacaaa gaatgaactt gttcaataca atcaaagttc tctcagtgaa 721 atagaagatt ccctccctcc tggtaaagcc gtgttttata catgggctga tccggtgggc 781 tctagaaggc tgaagtggag atgtagaaaa agccatggtg aagtaacaca gaaggatgat 841 atgatgatgc ctatagattt gggggaaaag acaatatatt tagtttcatt ctttgaaggt 901 ttacaacgca ttattttatt cactgaagat ccaagggtat ttaaagtaac atatgaaagt 961 gagaaagcag agttagcaga gcaagaaatt gcagtggcat tacaagatgt tggaatttct 1021 cttgtcaaca attacacgaa gcaagaagta gcctatatag gcattacaag ttctgatgtg 1081 gtttgggaaa caaagcccaa gaagaaggca agatgggagc caatgagtgt aaagcacact 1141 gagaagttag agagagaatt taaggaatat actgaatctt ctccttcaga agataaggtt 1201 attcagttgg acactaatgt tccggttcgc ctaaccccta ctggtcataa catgaaaatt 1261 ctgcagccgc atgtaatagc tctacgaaga aattatcttc cagcattaaa agtggaatat 1321 aacacatctg cacatcaatc atcatttaga attcagattt acagaataca gatccaaaat 1381 cagatacatg gtgctgtatt tccctttgtg ttttatcctg ttaaacctcc aaagtcggtc 1441 accatggatt cagcaccaaa gccctttaca gatgtcagta ttgtcatgag atctgcagga 1501 cattcccaga tatcacgtat taagtatttc aaagtattga ttcaagaaat ggatctcagg 1561 ttagatcttg ggtttatcta tgctttaaca gaccttatga cagaagctga ggtgactgaa 1621 aatacagagg ttgagctttt tcataaagat atagaagctt tcaaagaaga atataaaaca 1681 gcctcattag tagatcaatc acaagtcagc ctctatgaat attttcatat atctcctatc 1741 aagttacatt taagtgtttc actgagttcc ggcagagaag aagctaaaga ttcaaaacaa 1801 aatggaggac tgattccagt tcattcttta aatcttttgc tgaagagtat tggtgccaca 1861 ctgacagatg tacaagatgt agtttttaag cttgcatttt ttgaactcaa ctatcagttc 1921 catacaacat ccgatctaca gtctgaagtc ataagacact attcaaaaca ggccattaag 1981 cagatgtacg tactcattct tggacttgat gttttgggaa atccatttgg cttaattaga 2041 gaattttctg aaggtgtaga agcatttttt tatgaacctt accagggagc catccagggt 2101 cctgaagagt ttgtggaagg aatggcacta ggacttaagg cactagttgg tggagctgtt 2161 ggtggattgg ctggtgctgc ctccaaaatc accggtgcta tggctaaggg ggtagcagct 2221 atgaccatgg atgaagacta ccaacagaag agaagagaag ccatgaataa gcaaccagct 2281 ggttttagag aaggcatcac tcgtggagga aaaggcttag tttctggatt tgttagtggc 2341 ataacaggaa ttgttacaaa accaatcaaa ggagctcaaa aaggaggagc agctggtttc 2401 tttaaaggtg ttgggaaagg tttagtagga gcggtagcaa ggccaactgg aggcatcata 2461 gacatggcta gcagtacatt tcaggggata aaaagagcta cagagacttc tgaagtggag 2521 agtctgcgac ctcctcggtt cttcaatgaa gatggagtta tcagaccgta caggttgagg 2581 gatgggactg gaaatcaaat gttacaggtc atggaaaatg gaagatttgc aaaatacaaa 2641 tattttaccc atgtcatgat caataagaca gatatgctaa tgataaccag acgtggtgta 2701 ttgtttgtaa caaagggaac atttggacaa ctcacgtgtg agtggcagta tagttttgat 2761 gaatttacca aagagccatt cattgttcat gggagaagat tgcgcattga agcaaaggaa 2821 cgagtgaagt ctgtatttca tgccagagag tttggaaaaa taattaactt caagacccca 2881 gaggatgcca ggtggatcct cacaaagcta caagaagcaa gagaaccttc tccgagcctc 2941 tgacagagaa cactgcctga agacacacag caataagtga ttacagctcc tagactacct 3001 tccaaaacct gtttgggaag catattacag aaatgatttc aagtaccctg tattctggat 3061 gctaaaaaac aaaaacaaac //