LOCUS X64102 4659 bp DNA linear PLN 09-SEP-1992
DEFINITION S.cereale DNA for dispersed repeat sequence (R173-3).
ACCESSION X64102
VERSION X64102.1
KEYWORDS dispersed repeat sequence; R173 family; retrotransposon-like.
SOURCE Secale cereale (rye)
ORGANISM Secale cereale
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Secale.
REFERENCE 1 (bases 1 to 4659)
AUTHORS Langridge P.
JOURNAL Submitted (09-JAN-1992) to the INSDC. P. Langridge, University of
Adelaide, Centre for Cereal Biotechnology, Waite Agricultural Res
Inst, Glen Osmond, South Australia 5064, AUSTRALIA
REFERENCE 2 (bases 1 to 4659)
AUTHORS Rogowosky P., Liu J.Y., Manning S., Taylor C., Langridge P.
TITLE Structural heterogeneity in the R173 family of rye specific
repetitive DNA sequences
JOURNAL Plant Mol. Biol. 20(1), 95-102(1992).
PUBMED 1325206
COMMENT See also X64100-3
FEATURES Location/Qualifiers
source 1..4659
/organism="Secale cereale"
/chromosome="1 (short arm)"
/strain="Chinese Spring 1BL/1RS, 1AL/1RS, 1DL/1RS triple
transloction from Rye"
/mol_type="genomic DNA"
/clone_lib="lambda EMBL3"
/db_xref="taxon:4550"
BASE COUNT 1148 a 965 c 953 g 1593 t
ORIGIN
1 ggatcccact gaaaattatt atgagaagtg aacatatgct tatagatatt tcaataatat
61 caagttccct ttctttatgt tgaaggtttt gaagctgcac ttgttttgtc ttcctatgct
121 tattgctttg tgcttcaatg aattattcta ttgcaatatt cctatgcata ggaagcatgt
181 taggcttaaa tgtgtttggt atttgcttct tgatgctctc ttttgttctt caactcttat
241 tcctacgaga gtgtcattaa agcattatgc ctagcttaaa ggcataaaag aaagtgcttt
301 tgggaggcag cccacatgaa taaattttta tattttgctt ttgttgtgtc ttgatgttgt
361 ttactgctgt agcatcatca ttgtatcttt acttttcata tttgtgccaa gtatagcctc
421 tgattgctag aaagttcaaa agttgtgagg tgctgtccag gaaacagatt ctgtcattgg
481 atagaaaaat tcgtataaaa tcaccagatc atctttttgg tctgaatatt ttcgacagtg
541 ttctctatat aattgtcttt cgtgcgtcag ttctgaattt tttgatttga gttgtagaag
601 tatcccgaac aggtcaatta ctgcctgctg ttctgttttt cacagattct gtcctgtttt
661 gccttacctt cactttcaaa ttgagaactt gctttttctt tgcaaaaacc tttcggcaat
721 cttgagaaac agtagaactt caagaatatc cttatttcca gcaaggtata attattttat
781 taagggtact aacctcgcta atcagattat gatgagttat gtatgaaggg agttttcaag
841 tgtgcgaggg aagatgataa aaagattcag gagtgtcaag cgctcaagct tggggatgcc
901 cccatgcacc cccaagaaat attcaaggag actcaagcgt ctaagcttgg ggatgccccc
961 gtgcatcccc ttctccatca acattatcag ttcgtctttc gttccgctat atttttatca
1021 cttcatgtgt tatgtgctat gcttggagca tcttgctttt agttttcttt ttagtttttc
1081 ataacgagtc agaacccagc attcctttat gtgggagaga aacacgctcc acctctacct
1141 agaacattac atagaatttt catgtctatc tatgctgtgt gtgttctttg tcttttaaat
1201 agctactatc gtactttgct cttagtattc atgcttatct tttcaagagc ttttatttgg
1261 ttggttgctt gaactctctt taattaccat gctcacctta ttaagagagt ttgcttccgt
1321 tgcatgggtt aatgtgtcta tgataaagat gctactttca tgatggtgct tagtagttca
1381 ggttttatta tggttaatct caaatagctg gggggttccc attgtgttat tggagtacca
1441 acttggtttg tttgcctatg atgtggtatg gtttagtaat atcttccttc gagaatttat
1501 tttgattgac ttggcgtatg ctcacgcata ttcaagactg taaagaaagt ctgtcaagcc
1561 ttgatgatct tttgtttctg agtagcgata taactaccat gcctgattca atattgcttt
1621 gtcgctctgc atgattatga ccgtcattgc tctcttagtt ggtcgctccc agtcttttgc
1681 taacctccac ctgcactaat caaattaacc atgcaataca tagctcatgg gaaagtagcc
1741 taaaaactat tgtggtaaag aatatgttgc ttatgtattt tatttcttat gagttgcttg
1801 ctgagcggta accatgtttc tggggacgcc atcaactgtc acacttttgt tgaagatcat
1861 gtgagttgct atgcatgttc gtcttgtctg aagtaagggt gatttaccgt gggttgaatt
1921 aatatgcata ttgttagaga agaacattgg gccgccaacc aaagccatgc atcatggtgg
1981 aagttttagc ttggacctta atcctcaatc tctcatgata atatgcttat gcattaaaga
2041 ggagtccatc atctattttc tatgttgtcc cggtatggat gtcctcaagt tgagatctat
2101 caaaaacgag aaatcaaatg cgatctatct ccttggacct ttgtacaggt ggcttagagg
2161 tacccctttg tgacacttgg ttaaaacata tgcaatgcaa tgataaccca tggggatccg
2221 agctaattag gacaaggagc gagcactatt agtattcgat gcatgaggct tgcaacttat
2281 aggatgtttt atgcatgaca catatgaagt actactacca ttgacacaat tgcttccatg
2341 tttcaaaata aaaagctcta gcacttcaag caccaactac tgagagcatg attgtcattc
2401 tgagtgtaat gtgcattgtt ccaaagtagc attgtctttt gcatgattgt gatatcgttt
2461 attctgaaat gattgtatct agtcatcact taaaccttga aggtgcccct gcatttatgt
2521 tttgcatcac taaagggggc aagctagata tcactttatc atatttgcac atcatgttca
2581 ttgcaaatct ttttgatgtt tcagtttcat gttgtaaaac tttcagtcat ttgtgatttt
2641 ctcttgaggc aacttaatca ctatagaatc attgtctcag taagcttttg tcatatgact
2701 acgagaaagt cttatatggt taatagcatg tcaccacaga aattattctt gttatcattt
2761 acctactcga ggacgagcag gaattaagct tggggatgtt gatacgtcca aaacgtatct
2821 ataatttctg cttgctccat gccacttttg ggtgatattg ctatgatatt catacacttc
2881 catacacttt tgatcatatt tggactaact tactaatcca gtgcacccca gtgccagttt
2941 ctgttttcgg ctgtttttgt atttcaggtt ttcacgtttc gagaactgcc cagaaaaatc
3001 cagaaaaatt atataaaaaa tcagcgaacc ggaaacaaca ctgcgtccga agggcagcct
3061 ggggggggca caggggctcc aggcgccctg tgggcgcgcc ccccctgggc cgcgccgggg
3121 gggcgcctcg gccccccgag agccccccgg tgccctactt tggcatatat ttaaagggtt
3181 ccccgaaacc ctcagaacag gacttctttt cgcgatccca tctctgttct gccgccgccg
3241 ccgcttccaa gatcgggagc accaggagaa ctcttcccgg caccctgccg gaggggagga
3301 tcaccaccgg gagcttctcc accaccatgg acgcctcccg gatgactcgt gagtagtctc
3361 ccttggacca tgagtccatg accagtagct atgtgatgtt ctcctcccgt tcttgtgctt
3421 cactaattag tcctcgtgag ctgccctaca tgatcgaggc acctatgtaa tccttatgct
3481 gttgctatgt tgagtttgct gggaaccgat ggattatgag attatgttca gattgatctt
3541 gagtaatata tttgattcac ctcttttata ttttagttca taagtaattc ttgcatgttc
3601 tccgttgtta tctattgctt tggccgagta gtaggtagtg actccaagag ggaacgttat
3661 gctcgattgt gggttcatgc ccctcgatga ctagcttgag tgacagaaac atgagtctag
3721 gggatgtgct gttgccacaa gggggaaaac aactgtgctt gtgcccgcgg gtgcaaggat
3781 tgtttacttt acgcaaagtt cttttaatgc agttgtctgt tgcattgagt ttacactatg
3841 ggtgggactc gcaacttaat accagcgaga tgttctggat agatatctca aggtggatga
3901 ttagtagtag atgcagatgg aattcggtct acttactttg gtgtaccacc catgctttga
3961 acctcaacct ttcttgcaat gtattcagca ttggtttgcg ttcgtggtcc tgtcaattgc
4021 ccagctgtaa tttgtttacc tcgcatagct attttatcgt cttttgggag agagacatca
4081 ctagtgaaca tcttgagact caggtccata ttaccatcat tgatcacata cactatttac
4141 tttccgctat tttatttact attgcaaaac actatctatc actactatca tattgctttt
4201 aaccctttgt gaactacaag gccggagaga ttgacaacct ctctgtactc gttgggagca
4261 aagttatttg tatctgtgtg caggtccacg ttgattgcta attgcgccgt tagcacttga
4321 cacctacatg ttgaacctag gagtctctgg ggattcgatc cttggcatct ttgctagggg
4381 aaaacacttc tacttactgc atcttacacc ttccgcttgg ggtaaccaac gaggggttcg
4441 aggcccatca gagaccgtct tggcctatcc tttgccccaa aaggattggg ctatcttgct
4501 gcactcttgc tactactatc gttacttgct agttacaaaa ttatctttct atcaaactac
4561 tctgctactt acaatttcag cacttgtaga cattacctta ctaaagaaca cttgtcattt
4621 ccttgtgctc ctcgttgggt ttgacactct tacttatcg
//