LOCUS X03453 1553 bp DNA linear PHG 23-OCT-2008 DEFINITION Bacteriophage P1 cre gene for recombinase protein. ACCESSION X03453 VERSION X03453.1 KEYWORDS inverted repeat; recombinase; unidentified reading frame. SOURCE Escherichia virus P1 ORGANISM Escherichia virus P1 Viruses; Caudovirales; Myoviridae; Punavirus. REFERENCE 1 (bases 1 to 1553) AUTHORS Sternberg N., Sauer B., Hoess R., Abremski K. TITLE Bacteriophage P1 cre gene and its regulatory region. Evidence for multiple promoters and for regulation by DNA methylation JOURNAL J. Mol. Biol. 187(2), 197-212(1986). PUBMED 3486297 FEATURES Location/Qualifiers source 1..1553 /organism="Escherichia virus P1" /mol_type="genomic DNA" /db_xref="taxon:10678" misc_feature 35..68 /note="loxP recombination site" repeat_region 35..47 /note="inverted repeat" repeat_region 56..68 /note="inverted repeat" regulatory 147..152 /note="promoter pR1 put. -35 region" /regulatory_class="promoter" regulatory 155..160 /note="promoter pR1 put. altern. -35 region" /regulatory_class="promoter" regulatory 175..180 /note="promoter pR1 put. -10 region" /regulatory_class="promoter" regulatory 245..252 /note="put. rRNA binding site" /regulatory_class="ribosome_binding_site" CDS 256..477 /transl_table=11 /note="pot. ORF1 (aa 1-73)" /db_xref="UniProtKB/TrEMBL:Q38403" /protein_id="CAA27177.1" /translation="MGYSTAKVSTHLELEKNRGYWRAKGFDRDSCQLSLSRGEEKIER TRGRWRFYDENHKQVKAEPILYTLLKTII" regulatory 332..337 /note="promoter pR2 put. -35 region" /regulatory_class="promoter" regulatory 356..361 /note="promoter pR2 put. -10 region" /regulatory_class="promoter" regulatory 449..455 /note="promoter pR3 put. -35 region" /regulatory_class="promoter" regulatory 468..473 /note="promoter pR3 put. -10 region" /regulatory_class="promoter" regulatory 475..482 /note="put. rRNA-binding site" /regulatory_class="ribosome_binding_site" CDS 485..1516 /transl_table=11 /note="ORF2, put. cre protein (aa 1-343)" /db_xref="GOA:P06956" /db_xref="InterPro:IPR002104" /db_xref="InterPro:IPR010998" /db_xref="InterPro:IPR011010" /db_xref="InterPro:IPR013762" /db_xref="PDB:1CRX" /db_xref="PDB:1DRG" /db_xref="PDB:1F44" /db_xref="PDB:1KBU" /db_xref="PDB:1MA7" /db_xref="PDB:1NZB" /db_xref="PDB:1OUQ" /db_xref="PDB:1PVP" /db_xref="PDB:1PVQ" /db_xref="PDB:1PVR" /db_xref="PDB:1Q3U" /db_xref="PDB:1Q3V" /db_xref="PDB:1XNS" /db_xref="PDB:1XO0" /db_xref="PDB:2CRX" /db_xref="PDB:2HOF" /db_xref="PDB:2HOI" /db_xref="PDB:3C28" /db_xref="PDB:3C29" /db_xref="PDB:3CRX" /db_xref="PDB:3MGV" /db_xref="PDB:4CRX" /db_xref="PDB:5CRX" /db_xref="UniProtKB/Swiss-Prot:P06956" /protein_id="CAA27178.1" /translation="MSNLLTVHQNLPALPVDATSDEVRKNLMDMFRDRQAFSEHTWKM LLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRS GLPRPSDSNAVSLVMRRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRN LAFLGIAYNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGVT KLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEATHRLIYGAK DDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTNVNIVMNYIRNLDSETGA MVRLLEDGD" BASE COUNT 424 a 340 c 394 g 395 t ORIGIN 1 tgcgcagctg gacgtaaact cctcttcaga cctaataact tcgtatagca tacattatac 61 gaagttatat taagggttat tgaatatgat caatttacct gtaaatccat acagttcaat 121 accttagcag gtcaaatagt gaccacttga tcatttgatc aaggttgcgc tacgtaaaat 181 ctgtgaaaaa ttggcggtgt tagtcctaca gatttcgcgt accacttagc accaccaatc 241 aatcagaggt gaaaaatggg atattcaact gctaaagtgt ccactcatct tgagcttgag 301 aaaaaccgtg gttactggcg ggcaaaaggg tttgatcgtg atagttgcca actgtcatta 361 tcgcgcggtg aagagaaaat agaacgcacg cgcggtcgct ggcgtttcta tgacgagaac 421 cataaacagg taaaggcaga gccgatcctg tacactttac ttaaaaccat tatctgagtg 481 ttaaatgtcc aatttactga ccgtacacca aaatttgcct gcattaccgg tcgatgcaac 541 gagtgatgag gttcgcaaga acctgatgga catgttcagg gatcgccagg cgttttctga 601 gcatacctgg aaaatgcttc tgtccgtttg ccggtcgtgg gcggcatggt gcaagttgaa 661 taaccggaaa tggtttcccg cagaacctga agatgttcgc gattatcttc tatatcttca 721 ggcgcgcggt ctggcagtaa aaactatcca gcaacatttg ggccagctaa acatgcttca 781 tcgtcggtcc gggctgccac gaccaagtga cagcaatgct gtttcactgg ttatgcggcg 841 gatccgaaaa gaaaacgttg atgccggtga acgtgcaaaa caggctctag cgttcgaacg 901 cactgatttc gaccaggttc gttcactcat ggaaaatagc gatcgctgcc aggatatacg 961 taatctggca tttctgggga ttgcttataa caccctgtta cgtatagccg aaattgccag 1021 gatcagggtt aaagatatct cacgtactga cggtgggaga atgttaatcc atattggcag 1081 aacgaaaacg ctggttagca ccgcaggtgt agagaaggca cttagcctgg gggtaactaa 1141 actggtcgag cgatggattt ccgtctctgg tgtagctgat gatccgaata actacctgtt 1201 ttgccgggtc agaaaaaatg gtgttgccgc gccatctgcc accagccagc tatcaactcg 1261 cgccctggaa gggatttttg aagcaactca tcgattgatt tacggcgcta aggatgactc 1321 tggtcagaga tacctggcct ggtctggaca cagtgcccgt gtcggagccg cgcgagatat 1381 ggcccgcgct ggagtttcaa taccggagat catgcaagct ggtggctgga ccaatgtaaa 1441 tattgtcatg aactatatcc gtaacctgga tagtgaaaca ggggcaatgg tgcgcctgct 1501 ggaagatggc gattagccat taacgcgtaa atgattgcta taattagttg ata //