LOCUS       HIV1U16064              1051 bp    RNA     linear   VRL 30-JAN-1996
DEFINITION  Human immunodeficiency virus type 1 clone XSH144C12R envelope
            glycoprotein (env) gene, V1-V5 region, partial cds.
ACCESSION   U16064
VERSION     U16064.1
KEYWORDS    .
SOURCE      Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1
            Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
            Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Shapshak,P., Nagano,I., Xin,K., Bradley,W., McCoy,C.B., Sun,N.C.J.,
            Stewart,R.V., Yoshioka,M., Petito,C., Goodkin,K., Douyon,R.,
            Srivastava,A.K. and Crandall,K.A.
  TITLE     HIV-1 heterogeneity and cytokines. Neuropathogenesis
  JOURNAL   Adv. Exp. Med. Biol. 373, 225-238 (1995)
   PUBMED   7668155
REFERENCE   2  (bases 1 to 1051)
  AUTHORS   Xin,K., Shapshak,P., Nagano,I., Srivastava,A.K., Wood,C.,
            Stewart,R.V., Morikawa,S., Ushijima,H. and Okuda,K.
  TITLE     Heterogeneity of V1-V5 regions of the HIV envelope gene from brain,
            cerebrospinal fluid, and blood from patients with AIDS
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1051)
  AUTHORS   Shapshak,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-OCT-1994) Paul Shapshak, Department of Psychiatry,
            University of Miami School of Medicine, 1800 NW 10th Avenue,
            Elliott Building 2007, Miami, FL 33136, USA
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Human immunodeficiency virus 1"
                     /mol_type="genomic RNA"
                     /db_xref="taxon:11676"
                     /clone="XSH144C12R"
                     /tissue_type="cerebrospinal fluid (CSF)"
     gene            1..1051
                     /gene="env"
     CDS             <1..>1051
                     /gene="env"
                     /note="Caveat: please note that this sequence has been
                     determined to be similar to HIV-1/IIIB, GenBank Accession
                     Number K03455. Additional studies are being done to
                     investigate this."
                     /codon_start=1
                     /product="envelope glycoprotein, V1-V5 region"
                     /protein_id="AAA86070.1"
                     /translation="TPLCVSLKCTDLKNDTNTNSSSGRMIMEKGEIKNCSFNISTSIR
                     GKVQKEYAFFYKLDIIPIDNDTTSYKLTSCDTSVITQGCPKVSFGPIPIPYCAPAGFA
                     ILKCNNKTSNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSVNFTDNAK
                     TIIVQLNTSVEINCTRPSNNTRKRIRIQRGPGRAFVTIGKIGNMRQAHCNIGRPKWNN
                     TLKQIATKLREQFVNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNSTHLFNSTLVNS
                     TWSTEGSNNTEGSDTITLPCRIKQIINMWQKVGKAMYPPPISGQIRCSSNITGLLLTR
                     DGGNANNESEIFRPGG"
BASE COUNT          395 a          183 c          211 g          262 t
ORIGIN      
        1 accccactct gtgttagttt aaagtgcact gatttgaaga atgatactaa taccaatagt
       61 agtagcggga gaatgataat ggagaaagga gagataaaaa actgctcttt caatatcagc
      121 acaagcataa gaggtaaggt gcagaaagaa tatgcatttt tttataaact tgatataata
      181 ccaatagata atgatactac cagctataag ttgacaagtt gtgacacctc agtcattaca
      241 cagggctgtc caaaggtatc ctttgggcca attcccatac cttattgtgc cccggctggt
      301 tttgcgattc taaaatgtaa taataagacg tccaatggaa caggaccatg tacaaatgtc
      361 agcacagtac aatgtacaca tggaattagg ccagtagtat caactcaact gctgttaaat
      421 ggcagtctag cagaagaaga ggtagtaatt agatctgtca atttcacgga caatgctaaa
      481 accataatag tacagctgaa cacatctgta gaaattaatt gtacaagacc cagcaacaat
      541 acaagaaaaa gaatccgtat ccagagagga ccagggagag catttgttac aatagggaaa
      601 ataggaaata tgagacaagc acattgtaac attggtagac caaaatggaa taacacttta
      661 aaacagatag ctaccaaatt aagagaacaa tttgtaaata ataaaacaat aatctttaag
      721 caatcctcag gaggggaccc agaaattgta acgcacagtt ttaattgtgg tggggaattt
      781 ttctactgta attcaacaca tctgtttaat agtactttgg ttaatagtac ttggagtact
      841 gaagggtcaa ataacactga aggaagtgac acaatcaccc tcccatgcag aataaaacaa
      901 attataaaca tgtggcagaa agtaggaaaa gcaatgtatc cccctcccat cagtggacaa
      961 attagatgtt catcaaatat tacagggctg ctattaacaa gagatggtgg taatgccaac
     1021 aatgagtccg agatcttcag acctggagga g
//