LOCUS       MT042776                 294 bp    RNA     linear   VRL 06-APR-2020
DEFINITION  Severe acute respiratory syndrome coronavirus 2 isolate
            SARS-CoV-2/human/Wuhan/Tongji-04/2020 orf1ab polyprotein,
            RNA-dependent RNA polymerase region, gene, partial cds.
ACCESSION   MT042776
VERSION     MT042776.1
KEYWORDS    .
SOURCE      Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
  ORGANISM  Severe acute respiratory syndrome coronavirus 2
            Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
            Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae;
            Betacoronavirus; Sarbecovirus; Severe acute respiratory
            syndrome-related coronavirus.
REFERENCE   1  (bases 1 to 294)
  AUTHORS   Liu,W., Zhang,Q., Song,H., Xiang,R., Sun,Z. and Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-FEB-2020) Department of Clinical Laboratory, Tongji
            Hospital, Tongji Medical College, Huazhong University of Science
            and Technology, Jiefang Road 1095#, Wuhan City, Hubei Province
            430030, China
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Severe acute respiratory syndrome coronavirus
                     2"
                     /mol_type="genomic RNA"
                     /isolate="SARS-CoV-2/human/Wuhan/Tongji-04/2020"
                     /isolation_source="swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:2697049"
                     /country="China: Wuhan"
                     /collection_date="Jan-2020"
     CDS             <1..>294
                     /codon_start=1
                     /product="orf1ab polyprotein"
                     /protein_id="QHZ87578.1"
                     /translation="SLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYA
                     NSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNE"
     mat_peptide     <1..>294
                     /product="RNA-dependent RNA polymerase"
                     /note="RdRp"
BASE COUNT           87 a           51 c           63 g           93 t
ORIGIN      
        1 agcttgtcac accgtttcta tagattagct aatgagtgtg ctcaagtatt gagtgaaatg
       61 gtcatgtgtg gcggttcact atatgttaaa ccaggtggaa cctcatcagg agatgccaca
      121 actgcttatg ctaatagtgt ttttaacatt tgtcaagctg tcacggccaa tgttaatgca
      181 cttttatcta ctgatggtaa caaaattgcc gataagtatg tccgcaattt acaacacaga
      241 ctttatgagt gtctctatag aaatagagat gttgacacag actttgtgaa tgag
//