LOCUS MH498995 982 bp cRNA linear VRL 09-AUG-2018 DEFINITION Influenza A virus (A/environment/Chile/C20141/2016(H13N9)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds. ACCESSION MH498995 VERSION MH498995.1 DBLINK BioProject: PRJNA309181 KEYWORDS . SOURCE Influenza A virus ORGANISM Influenza A virus Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus influenzae. REFERENCE 1 (bases 1 to 982) AUTHORS Bravo-Vasquez,N., Bahl,J., Hamilton-West,C. and Schultz-Cherry,S. CONSRTM Centers of Excellence for Influenza Research and Surveillance (CEIRS) TITLE Direct Submission JOURNAL Submitted (18-JUN-2018) St. Jude Center of Excellence for Influenza Research and Surveillance (CEIRS), Memphis, TN 38105, USA COMMENT This submission was made by the CEIRS Data Processing and Coordinating Center (DPCC) on behalf of the St. Jude Center of Excellence for Influenza Research and Surveillance (CEIRS). This work was supported by National Institute of Allergy and Infectious Diseases, National Institutes of Health, grant HHSN272201400006C. ##Assembly-Data-START## Assembly Method :: IRMA v. 0.6.7 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..982 /organism="Influenza A virus" /mol_type="viral cRNA" /strain="A/environment/Chile/C20141/2016" /serotype="H13N9" /isolation_source="feces" /db_xref="taxon:11320" /segment="7" /country="Chile" /collection_date="13-Dec-2016" gene 1..982 /gene="M2" CDS join(1..26,715..982) /gene="M2" /codon_start=1 /product="matrix protein 2" /protein_id="AXF49383.1" /translation="MSLLTEVETPTRNEWECRCSDSSDPLVIAASIIGILHLILWILD RLFFKCIYRRLKYGLKKGPSTEGVPESMREEYRQEQQSAVDVDNGHFVNIELE" gene 1..759 /gene="M1" CDS 1..759 /gene="M1" /codon_start=1 /product="matrix protein 1" /protein_id="AXF49382.1" /translation="MSLLTEVETYVLSIVPSGPLKAEIAQRLEDVFAGKNTDLEALME WLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDRAVKLYRK LKREITFHGAKEVALSYSTGALASCMGLIYNRMGTVTTEVAFGLVCATCEQIADSQHR SHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRT IGTHPSSSAGLKDDLLENLQAYQKRMGVQMQRFK" BASE COUNT 278 a 212 c 266 g 226 t ORIGIN 1 atgagtcttc taaccgaggt cgaaacgtac gttctctcta tcgtcccgtc aggccccctc 61 aaagccgaga tcgcacagag acttgaagat gtgtttgcag ggaagaacac cgatcttgag 121 gcactcatgg aatggctaaa gacaagacca atcctgtcac ctctgactaa ggggatttta 181 ggatttgtgt tcacgctcac cgtgcccagt gagcgaggac tgcagcgtag acgctttgtt 241 caaaatgccc ttaatgggaa tggggatcca aacaacatgg acagagcagt caaactgtac 301 agaaagctga aaagggagat aacattccat ggggcaaaag aagtggcact tagttattcg 361 actggtgcac ttgccagttg catgggcctc atatacaatc ggatggggac tgtgaccact 421 gaagtggcat ttggcctagt gtgcgccaca tgtgagcaga tagctgattc ccagcaccgg 481 tctcacagac aaatggtgac gacaaccaac ccactaatca ggcacgagaa cagaatggtg 541 ctggccagta ctacagctaa ggccatggag cagatggcag gatcaagtga gcaggcagca 601 gaggctatgg aagttgctag tcaggccaga cagatggtgc aggcaatgag gaccattggg 661 actcatccta gctccagtgc tggtctaaaa gatgatcttc ttgaaaattt gcaggcctac 721 cagaaacgaa tgggagtgca gatgcagcga ttcaagtgat cctcttgtta tagccgcaag 781 catcattggg atcttgcact tgatattgtg gatacttgat cgtcttttct tcaaatgcat 841 ttatcgtcgc cttaaatacg gtttgaaaaa agggccttct acggaaggag tgcctgagtc 901 tatgagggaa gaatatcggc aggaacagca gagtgctgtg gatgttgaca atggtcattt 961 tgtcaacata gagctggagt aa //