LOCUS MH498691 1413 bp cRNA linear VRL 09-AUG-2018 DEFINITION Influenza A virus (A/environment/Chile/C20141/2016(H13N9)) segment 6 neuraminidase (NA) gene, complete cds. ACCESSION MH498691 VERSION MH498691.1 DBLINK BioProject: PRJNA309181 KEYWORDS . SOURCE Influenza A virus ORGANISM Influenza A virus Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus influenzae. REFERENCE 1 (bases 1 to 1413) AUTHORS Bravo-Vasquez,N., Bahl,J., Hamilton-West,C. and Schultz-Cherry,S. CONSRTM Centers of Excellence for Influenza Research and Surveillance (CEIRS) TITLE Direct Submission JOURNAL Submitted (18-JUN-2018) St. Jude Center of Excellence for Influenza Research and Surveillance (CEIRS), Memphis, TN 38105, USA COMMENT This submission was made by the CEIRS Data Processing and Coordinating Center (DPCC) on behalf of the St. Jude Center of Excellence for Influenza Research and Surveillance (CEIRS). This work was supported by National Institute of Allergy and Infectious Diseases, National Institutes of Health, grant HHSN272201400006C. ##Assembly-Data-START## Assembly Method :: IRMA v. 0.6.7 Sequencing Technology :: IonTorrent ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..1413 /organism="Influenza A virus" /mol_type="viral cRNA" /strain="A/environment/Chile/C20141/2016" /serotype="H13N9" /isolation_source="feces" /db_xref="taxon:11320" /segment="6" /country="Chile" /collection_date="13-Dec-2016" gene 1..1413 /gene="NA" CDS 1..1413 /gene="NA" /codon_start=1 /product="neuraminidase" /protein_id="AXF49377.1" /translation="MNPNQKILCTSATAIVIGTIAVLIGIANLGLNIGLHLKPNCNCS HSQPEATNASQTIINNYYNETNITQISNTNIQMEERASREFNNLTKGLCIINSWHIYG KDNAVRIGEDSDVLVTREPYVSCDPDECRFYALSQGTTIRGRHSNGTIHDRSQYRALI SWPLSSPPTVYNSRVECIGWSSTSCHDGRARMSICISGPNNNASAVIWYNRRPVTEIN TWARNILRTQESECVCHNGVCPVVFTDGSATGPAETRVYYFKEGKILKWEPLTGTAKH IEECSCYGKQAGITCTCRDNWQGSNRPVIQIDPVAMTHTSQYICSPVLTDNPRPNDPT VGKCNDPYPGNNNNGVKGFSYLDGGNTWLGRTISIASRSGYEMLKVPNALTDDKSKPI QGQTIVLNTDWSGYSGSFMDYWAEGECYRACFYVELIRGRPKEDKVWWTSNSIVSMCS STEFLGQWNWPDGAKIEYFL" BASE COUNT 480 a 297 c 334 g 302 t ORIGIN 1 atgaatccaa atcagaagat tctatgcact tctgccaccg ctattgtaat aggcacgatt 61 gcagtactaa tagggatagc aaacttagga ttgaatatag ggctacatct gaaaccaaac 121 tgcaactgct cacactcaca acctgaagca accaatgcaa gccaaacaat aataaacaac 181 tactataacg aaacgaacat aacccaaata agcaatacca acatccagat ggaggaaagg 241 gcaagtagag aattcaataa cttgacaaaa gggctttgca tcataaattc atggcatata 301 tatggaaaag acaatgcagt aagaattggg gaggactcgg atgttctagt aacgagggaa 361 ccctatgttt cctgtgatcc agatgaatgc aggttctatg ctctcagcca aggaacaaca 421 attagaggga gacactcaaa cgggaccata cacgacaggt ctcagtaccg cgctttgata 481 agctggccac tgtcatcacc acccacagtg tacaacagca gggtcgaatg cattggctgg 541 tcgagtacca gttgccatga tggcagagcc aggatgtcga tatgtatatc agggccgaac 601 aacaatgcat cagcagtaat ttggtacaat agaaggcctg ttacggaaat caatacatgg 661 gcccgaaata tattgcggac acaagaatca gaatgcgtat gccataatgg tgtttgcccg 721 gtggtgttca cagatgggtc cgccactgga cctgcagaaa caagagtata ctacttcaaa 781 gaagggaaaa tactaaaatg ggaacctcta acaggaactg ctaaacacat agaagagtgc 841 tcatgctacg gaaaacaggc aggcattact tgcacgtgca gagataattg gcagggctca 901 aataggccag tgatccaaat agatccagta gcgatgacac atactagtca gtatatatgc 961 agccctgttc ttacagataa tcccagaccg aacgacccaa ctgtaggtaa atgcaatgac 1021 ccttatcctg gaaataacaa caatggagtc aaaggattct catacctgga cgggggtaac 1081 acttggctag gaagaacaat aagcatagct tcaagatcgg gatacgagat gctaaaagtg 1141 ccaaatgcat tgaccgatga taagtcaaag cccattcaag gccaaacaat cgtattaaac 1201 actgattgga gtggctacag cgggtccttc atggactatt gggcagaggg ggagtgctac 1261 cgagcatgtt tttatgtgga gttaatccgc ggaagaccca aggaggacaa agtatggtgg 1321 accagtaata gtatagtgtc gatgtgttcc agcacagaat tccttggaca gtggaactgg 1381 ccggatgggg ctaaaataga gtacttcctc taa //