LOCUS AH002678 2716 bp DNA linear HUM 01-AUG-2016
DEFINITION Homo sapiens isolate Patient with P-450(C21) deficiency membrane
protein (CD3E) gene, complete cds.
ACCESSION AH002678 L34846 M23317 M23318 M23319 M23320 M23321 M23322 M23323
VERSION AH002678.2
KEYWORDS CD3-epsilon protein; membrane protein.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2716)
AUTHORS Clevers,H.C., Dunlap,S., Wileman,T.E. and Terhorst,C.
TITLE Human CD3-epsilon gene contains three miniexons and is transcribed
from a non-TATA promoter
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 85 (21), 8156-8160 (1988)
PUBMED 3267235
COMMENT On or before Aug 1, 2016 this sequence version replaced M23317.1,
M23318.1, M23319.1, M23320.1, M23321.1, L34846.1, M23322.1,
M23323.1, AH002678.1.
FEATURES Location/Qualifiers
source 1..2716
/organism="Homo sapiens"
/mol_type="genomic DNA"
/isolate="Patient with P-450(C21) deficiency"
/db_xref="taxon:9606"
/map="11q23"
/cell_type="lymphocyte"
/tissue_type="peripheral blood"
gene 383..2711
/gene="CD3E"
mRNA join(383..427,545..652,781..801,926..940,1061..1078,
1206..1454,1570..1737,1853..1896,2015..2711)
/gene="CD3E"
/note="G00-119-764"
exon 383..427
/gene="CD3E"
/note="G00-119-764"
/number=1
intron 428..544
/gene="CD3E"
/note="G00-119-764"
/number=1
exon 545..652
/gene="CD3E"
/note="G00-119-764"
/number=2
CDS join(604..652,781..801,926..940,1061..1078,1206..1454,
1570..1737,1853..1896,2015..2074)
/gene="CD3E"
/codon_start=1
/product="membrane protein"
/protein_id="AAA52295.1"
/db_xref="GDB:G00-119-764"
/translation="MQSGTHWRVLGLCLLSVGVWGQDGNEEMGGITQTPYKVSISGTT
VILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRG
SKPEDANFYLYLRARVCENCMEMDVMSVATIVIVDICITGGLLLLVYYWSKNRKAKAK
PVTRGAGAGGRQRGQNKERPPPVPNPDYEPIRKGQRDLYSGLNQRRI"
intron order(653..666,<767..780)
/gene="CD3E"
/note="3.8 kb gap; G00-119-764"
/number=2
gap 667..766
/estimated_length=unknown
exon 781..801
/gene="CD3E"
/note="G00-119-764"
/number=3
intron order(802..>815,<916..925)
/gene="CD3E"
/note="1.0 kb gap; G00-119-764"
/number=3
gap 816..915
/estimated_length=unknown
exon 926..940
/gene="CD3E"
/note="G00-119-764"
/number=4
intron order(941..>945,<1046..1060)
/gene="CD3E"
/note="3.3 kb gap; G00-119-764"
/number=4
gap 946..1045
/estimated_length=unknown
exon 1061..1078
/gene="CD3E"
/note="G00-119-764"
/number=5
intron order(1079..>1091,<1192..1205)
/gene="CD3E"
/note="0.5 kb gap; G00-119-764"
/number=5
gap 1092..1191
/estimated_length=unknown
exon 1206..1454
/gene="CD3E"
/note="G00-119-764"
/number=6
intron order(1455..1466,<1567..1569)
/gene="CD3E"
/note="0.8 kb gap; G00-119-764"
/number=6
gap 1467..1566
/estimated_length=unknown
exon 1570..1737
/gene="CD3E"
/note="G00-119-764"
/number=7
intron order(1738..>1743,<1844..1852)
/gene="CD3E"
/note="1.0 kb gap; G00-119-764"
/number=7
gap 1744..1843
/estimated_length=unknown
exon 1853..1896
/gene="CD3E"
/note="G00-119-764"
/number=8
intron order(1897..>1903,<2004..2014)
/gene="CD3E"
/note="0.8 kb gap; G00-119-764"
/number=8
gap 1904..2003
/estimated_length=unknown
exon 2015..2711
/gene="CD3E"
/note="G00-119-764"
/number=9
BASE COUNT 464 a 555 c 455 g 542 t
ORIGIN
1 tgttaataag aggctgctcc ctgtgctcca tgcctgatcc accacacaga aagcaaattt
61 tcagtgcatc tccctcttcc tgtcagagct tatagaggaa ggaagacccc gcaatgtgga
121 ggcatattgt attacaatta cttttaatgg caaaaactgc agttacttgt gccaacctac
181 tacatggtct ggacagctaa atgtcatgta tttttcatgg cccctccagg tattgtcaga
241 gtcctcttgt ttggccttct aggaaggctg tgggacccag ctttcttcaa ccagtccagg
301 tggaggcctc tgccttgaac gtttccaagt gaggtaaaac ccgcaggccc agaggcctct
361 ctacttcctg tgtgaggttc agaaaccctc ctcccctccc agcctcaggt gcctgcttca
421 gaaaatggtg agtctctctc ttataaagcc ctcctttttc atcctagcat tgggagcaat
481 ggccccaggg tccttatctc tagcagatgt tttgaaaaag tcatctgttt tgcttttttt
541 ccagaagtag taagtctgct ggcctccgcc atcttagtaa agtaacagtc ccatgaaaca
601 aagatgcagt cgggcactca ctggagagtt ctgggcctct gcctcttatc aggtgagtag
661 gatggannnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnntatt atttttctag
781 ttggtgtttg ggggcaagat ggtgagatat gctttnnnnn nnnnnnnnnn nnnnnnnnnn
841 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
901 nnnnnnnnnn nnnnnccctt ttcaggtaat gaagaaatgg gtaatnnnnn nnnnnnnnnn
961 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1021 nnnnnnnnnn nnnnnnnnnn nnnnnttttt tcattttcag gtggtattac acagacacgt
1081 gagtttattg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1141 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nttctttctc
1201 cccagcatat aaagtctcca tctctggaac cacagtaata ttgacatgcc ctcagtatcc
1261 tggatctgaa atactatggc aacacaatga taaaaacata ggcggtgatg aggatgataa
1321 aaacataggc agtgatgagg atcacctgtc actgaaggaa ttttcagaat tggagcaaag
1381 tggttattat gtctgctacc ccagaggaag caaaccagaa gatgcgaact tttatctcta
1441 cctgagggca agaggtaacc aggtctnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1561 nnnnnncagt gtgtgagaac tgcatggaga tggatgtgat gtcggtggcc acaattgtca
1621 tagtggacat ctgcatcact gggggcttgc tgctgctggt ttactactgg agcaagaata
1681 gaaaggccaa ggccaagcct gtgacacgag gagcgggtgc tggcggcagg caaaggggta
1741 aggnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1801 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnncctccgc aggacaaaac
1861 aaggagaggc caccacctgt tcccaaccca gactatgtaa gtgnnnnnnn nnnnnnnnnn
1921 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1981 nnnnnnnnnn nnnnnnnnnn nnnttcaccc ccaggagccc atccggaaag gccagcggga
2041 cctgtattct ggcctgaatc agagacgcat ctgacctctt ggagaacact gcctcccgct
2101 ggcccaggtc tcctctccag tccccctgcg actccctgtt tcctgggcta gtcttggacc
2161 ccacgagaga gaatcgttcc tcagcctcat ggtgaactcg cgccctccag cctgatcccc
2221 cgctccctcc tccctgcctt ctctgctggt acccagtcct aaaatattgc tgcttcctct
2281 tcctttgaag catcatcagt agtcacaccc tcacagctgg cctgccctct tgccaggata
2341 tttatttgtg ctattcactc ccttcccttt ggatgtaact tctccgttca gttccctcct
2401 tttcttgcat gtaagttggt cccccatccc aaagtattcc atctactttt ctatcgccgt
2461 ccccttttgc agccctctct ggggatggac tgggtaaatg ttgacagagg ccctgccccg
2521 ttcacagatc ctggccctga gccagccctg tgctcctccc tcccccaaca ctccctacca
2581 accccctaat cccctactcc ctccaacccc ccctcccact gtaggccact ggatggtcat
2641 ttggcatctc cgtatatgtg ctctggctcc tcagctgaga gagaaaaaaa taaactgtat
2701 ttggctgcaa agagtt
//