LOCUS AH001875 3562 bp DNA linear ROD 01-AUG-2016
DEFINITION Mus musculus domesticus strain BALB/c T3-delta protein (CD3-delta)
and CD3 gamma-chain (CD3) genes, complete cds.
ACCESSION AH001875 J03590 M18222 M18223 M18224 M18225 M18226 M18227 M18228
VERSION AH001875.2
KEYWORDS CD3 antigen.
SOURCE Mus musculus domesticus (western European house mouse)
ORGANISM Mus musculus domesticus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 3562)
AUTHORS Saito,H., Koyama,T., Georgopoulos,K., Clevers,H., Haser,W.G.,
LeBien,T., Tonegawa,S. and Terhorst,C.
TITLE Close linkage of the mouse and human CD3 gamma- and delta-chain
genes suggests that their transcription is controlled by common
regulatory elements
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 84 (24), 9131-9134 (1987)
PUBMED 2827170
COMMENT On or before Aug 1, 2016 this sequence version replaced M18222.1,
M18223.1, M18224.1, M18225.1, M18226.1, M18227.1, M18228.1,
AH001875.1.
FEATURES Location/Qualifiers
source 1..3562
/organism="Mus musculus domesticus"
/mol_type="genomic DNA"
/strain="BALB/c"
/sub_species="domesticus"
/db_xref="taxon:10092"
/tissue_type="liver"
intron complement(<1..19)
/number=1
gene complement(20..74)
/gene="CD3-delta"
CDS complement(20..74)
/gene="CD3-delta"
/note="T3-delta protein"
/codon_start=1
/protein_id="AAA37399.1"
/translation="MEHSGILASLILIAVLPQ"
gene 1536..3484
/gene="CD3"
exon 1536..1694
/gene="CD3"
/number=1
CDS join(1640..1694,1868..1891,2068..2295,2477..2608,
2785..2828,3004..3069)
/gene="CD3"
/note="T3-gamma protein"
/codon_start=1
/product="CD3 gamma-chain"
/protein_id="AAA37400.1"
/translation="MEQRKGLAGLFLVISLLQGTVAQTNKAKNLVQVDGSRGDGSVLL
TCGLTDKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETSNPLQVYYR
MCENCIELNIGTISGFIFAEVISIFFLALGVYLIAGQDGVRQSRASDKQTLLQNEQLY
QPLKDREYDQYSHLQGNQLRKK"
intron 1695..>1726
/gene="CD3"
/number=1
gap 1727..1826
/estimated_length=unknown
intron <1827..1867
/gene="CD3"
/number=1
exon 1868..1891
/gene="CD3"
/number=2
intron 1892..>1926
/gene="CD3"
/number=2
gap 1927..2026
/estimated_length=unknown
intron <2027..2067
/gene="CD3"
/number=2
exon 2068..2295
/gene="CD3"
/number=3
intron 2296..>2335
/gene="CD3"
/number=3
gap 2336..2435
/estimated_length=unknown
intron <2436..2476
/gene="CD3"
/number=3
exon 2477..2608
/gene="CD3"
/number=4
intron 2609..>2643
/gene="CD3"
/number=4
gap 2644..2743
/estimated_length=unknown
intron <2744..2784
/gene="CD3"
/number=4
exon 2785..2828
/gene="CD3"
/number=5
intron 2829..>2863
/gene="CD3"
/number=5
gap 2864..2963
/estimated_length=unknown
intron <2964..3003
/gene="CD3"
/number=5
exon 3004..3086
/gene="CD3"
/number=6
intron 3087..>3110
/gene="CD3"
/number=6
gap 3111..3210
/estimated_length=unknown
intron <3211..3251
/gene="CD3"
/note="intron F"
exon 3252..3484
/gene="CD3"
/number=7
BASE COUNT 852 a 680 c 692 g 738 t
ORIGIN Chromosome 9.
1 ttgaagatgc ctcccttacc ttgggggaga acagcaatca gtatcagact agccagaatc
61 ccgctgtgtt ccatcttcca gagggaatca tgcaacaaat agaggcaagc cacaggatga
121 tcagccaggg ttagcactat cctccgccaa cagactcatg ggtattcaga aaaaggaaga
181 gtgggggagg aactagaaga aatctgcctc tctaccttct gcctttgatg gtgtaagact
241 gtcaaagcaa cagtgggcta ggtgtggggt aagacacaaa caggtgcaaa ctgctctttc
301 tgaagcaaag agtttgggat gattgataca aagcagagac tatgaggaaa gtttgttcag
361 aattctagga agtgtaaggg aatttagaat agcctttcct ggtaacaaaa aacaaatagc
421 aatagtcact ggtaacaaac aaagaagatt ttgggcttcc tatgaacaat acaactacat
481 ttactcacaa acaaggaagt gccacctctt tagatccact gagagaaact attacacaag
541 ccacattagc agatcctctt gtttctgatc agtctcagga cccttcacag gacactctgg
601 gacaccacat caagctgctt ctagccagtg ggaagatgga cttgagaagc cctcatccag
661 acatcggaat cctaggtcca gcacatagta cccatgcatg gagtgtctca gagcttgtct
721 ccctcagcat cactctaagg attgggggag gagtgtttgc atcatgccag ccacattaag
781 ccatctcagt atgagagtct tcttaacaat ataatcaatc cactcatttg tagaatcgat
841 cctccccagg agacaataga cttttctacc atgtgctgtg gggatctaac tttccacact
901 gctataatca gaaggtcatc tgtctgggga caaaattatc ctttgtgcct ggaatcacat
961 aggaattctg tgaatttctg ttatgcattg actggctaaa ggagacaata gcctgagacc
1021 ctggaactag cccagggtca tacaccaaga aataagctag ttgtcccgtt gggatgttct
1081 cttctaggtg ggtaccactt agatgttctc aaaagaacag tgtcaaaaat ctcttaagga
1141 aggtctactc taagatgctt ttccattcag aactccagtc tcatacatgg aaaagttctg
1201 cctaaaccca tgagttctgg gatcaagtga caaacaagtc cagacctagc cagaagaaca
1261 ggcaggaaca ttcatcactg tcatcgagaa aaaggctcag tggagtcttc aacctattgc
1321 gcatagaggt tctagtggta aaggggtttc caagtgggaa tctagaacct catcccctgc
1381 cacctgctat cctgcaagcc ttaacaacaa caaaagagaa aacgagataa gtcagagcat
1441 caacacccct gctggggccc ctgctgccca cactctacag gagagggcgg agacacctgg
1501 tattgcctct actcagagtc ccagctcaat gcatgctggg tggagccagg ccagctgctg
1561 cacaggctgt ctgggtggct gggtggctgg gtggctaagg gactctcaat acttctactg
1621 gagaagcaaa gagactgaca tggagcagag gaagggtctg gctggcctct tcctggtgat
1681 ctctcttctt caaggtaaga gtttacttga gtctctgacc acactgnnnn nnnnnnnnnn
1741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1801 nnnnnnnnnn nnnnnnnnnn nnnnnncagt ccatgcccgg ctgatccttt ctctttctgt
1861 tttccaggca ctgtagccca gacaaataaa ggtaagagag atggtttctt tctattctca
1921 aattctnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1981 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnntaca aagacctgta
2041 acagagccac gccttttccc ttttcagcaa agaatttggt acaagtggat ggcagccgag
2101 gagacggttc tgtacttctg acttgtggct tgactgacaa gactatcaag tggcttaaag
2161 acgggagcat aataagtcct ctaaatgcaa ctaaaaacac atggaatctg ggcaacaatg
2221 ccaaagaccc tcgaggcacg tatcagtgtc aaggagcaaa ggagacgtca aaccccctgc
2281 aagtgtatta cagaagtatg taacctcttc actgtgtctg ttgggaatcc aggcgnnnnn
2341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2401 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnctgaa agaggtttgt ccctgcctgt
2461 gcctcgttcc ccacagtgtg tgaaaactgc attgagctaa acataggcac catatccggc
2521 tttatcttcg ctgaggtcat cagcatcttc ttccttgctc ttggtgtata tctcattgcg
2581 ggacaggatg gagttcgcca gtcaagaggt aaaagaatcc agatgtggtg gttcttgcaa
2641 ggcnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2701 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntatatat tttgtctgtt
2761 ttctttttgt gtgcgtgtgt gcagcttcag acaagcagac tctgttgcaa aatgaacagc
2821 tgtaccaggt aaggaattgg ggatgagaaa aagaacgctg tagnnnnnnn nnnnnnnnnn
2881 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2941 nnnnnnnnnn nnnnnnnnnn nnntgacaga acaataagtt gatgctgcta ttgtcctctt
3001 cagcccctca aggaccggga atatgaccag tacagccatc tccaaggaaa ccaactgagg
3061 aagaagtgaa ctcagcagga ctcagggtac gtgtgatcct caacgctgat nnnnnnnnnn
3121 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn tgagctttct gaccagttgc aaattttctt
3241 tctcgttcta ggtgtccccc cttctatcca gcacccagaa tcaaaacaat gcattttgga
3301 gagagcccag tagagagatt ttcaacccta caggtagact gcaagcagag aggaagaact
3361 gtcaaagaaa ttttggtctt tttttttttt ttcaaaataa aataaaagct tggaggagcc
3421 agtggtatga ctcagaagtg gagcacttgt caaccttgtt tggggttctc agcaccccac
3481 ccccagaccc cccaaaaaaa ttcagtgaag gaaaacaagc acagcgtggt gtttacagag
3541 tgccccctac tgggaaaatt gt
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