LOCUS       APHAVP1E                 602 bp    RNA     linear   VRL 28-APR-1993
DEFINITION  Foot and mouth disease virus (serotype A) variant VP1 capsid
            protein gene, partial cds.
ACCESSION   M16083
VERSION     M16083.1
KEYWORDS    vp1; vp1 capsid protein.
SOURCE      Foot-and-mouth disease virus
  ORGANISM  Foot-and-mouth disease virus
            Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
            Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Beck,E. and Strohmaier,K.
  TITLE     Subtyping of European foot-and-mouth disease virus strains by
            nucleotide sequence determination
  JOURNAL   J. Virol. 61 (5), 1621-1629 (1987)
   PUBMED   3033288
COMMENT     Original source text: Foot and mouth disease virus (serotype
            A/Bernbeuren(D)/1984), cDNA to viral RNA.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Foot-and-mouth disease virus"
                     /mol_type="genomic RNA"
                     /db_xref="taxon:12110"
     CDS             <1..>602
                     /codon_start=3
                     /product="VP1 capsid protein"
                     /protein_id="AAA42605.1"
                     /translation="TQRRHHTDVGFXMDRFVKINSLSPTHVIDLMXXXXHGXXXXLLR
                     AATYYFSDXEIVVRHDGNXTRVPNGAPEAALSNTSNPTAYNKAPFTRLALPYTAPHRV
                     LATVYNGTNKYSTDGPRRGDXGXXXARAAKQLPASFNYGAIRADTIHELLVRMKRAEL
                     YCPRPLLAIEVSSQDRHKQKIIAPARQLLNFDLLKLAGDV"
BASE COUNT          141 a          170 c          148 g          111 t
ORIGIN      
        1 aaacccagag acggcaccac acggatgtcg gtttcannat ggacagattt gtgaagataa
       61 acagtttgag tcctacgcat gtcattgacc tcatgcannn ncnccancac gggcnnnnnn
      121 nnnngctgtt gcgtgcagcc acgtactact tctctgactn ggagatcgtt gtgcggcatg
      181 acggnaattn gacncgggtg cccaacggtg cccctgaagc agctttgtca aataccagca
      241 accccactgc ctacaacaag gcaccgttca cgaggctcgc tctcccttac actgcgccac
      301 accgcgtgtt ggcaaccgtg tacaacggga cgaacaagta ctccacggac ggtccgagac
      361 gcggcgacnn gggnnngncn nnngcgcggg ccgcgaaaca acttcctgcc tcttttaact
      421 acggtgcaat cagggccgac accatccacg agcttctcgt gcgcatgaaa cgggcagagc
      481 tctactgccc caggccacta ttggcaatag aggtgtcttc acaagacagg cacaagcaaa
      541 agatcattgc acctgcaaga cagttgctga actttgacct acttaagttg gctggagacg
      601 tg
//