LOCUS APHAVP1E 602 bp RNA linear VRL 28-APR-1993 DEFINITION Foot and mouth disease virus (serotype A) variant VP1 capsid protein gene, partial cds. ACCESSION M16083 VERSION M16083.1 KEYWORDS vp1; vp1 capsid protein. SOURCE Foot-and-mouth disease virus ORGANISM Foot-and-mouth disease virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus. REFERENCE 1 (bases 1 to 602) AUTHORS Beck,E. and Strohmaier,K. TITLE Subtyping of European foot-and-mouth disease virus strains by nucleotide sequence determination JOURNAL J. Virol. 61 (5), 1621-1629 (1987) PUBMED 3033288 COMMENT Original source text: Foot and mouth disease virus (serotype A/Bernbeuren(D)/1984), cDNA to viral RNA. FEATURES Location/Qualifiers source 1..602 /organism="Foot-and-mouth disease virus" /mol_type="genomic RNA" /db_xref="taxon:12110" CDS <1..>602 /codon_start=3 /product="VP1 capsid protein" /protein_id="AAA42605.1" /translation="TQRRHHTDVGFXMDRFVKINSLSPTHVIDLMXXXXHGXXXXLLR AATYYFSDXEIVVRHDGNXTRVPNGAPEAALSNTSNPTAYNKAPFTRLALPYTAPHRV LATVYNGTNKYSTDGPRRGDXGXXXARAAKQLPASFNYGAIRADTIHELLVRMKRAEL YCPRPLLAIEVSSQDRHKQKIIAPARQLLNFDLLKLAGDV" BASE COUNT 141 a 170 c 148 g 111 t ORIGIN 1 aaacccagag acggcaccac acggatgtcg gtttcannat ggacagattt gtgaagataa 61 acagtttgag tcctacgcat gtcattgacc tcatgcannn ncnccancac gggcnnnnnn 121 nnnngctgtt gcgtgcagcc acgtactact tctctgactn ggagatcgtt gtgcggcatg 181 acggnaattn gacncgggtg cccaacggtg cccctgaagc agctttgtca aataccagca 241 accccactgc ctacaacaag gcaccgttca cgaggctcgc tctcccttac actgcgccac 301 accgcgtgtt ggcaaccgtg tacaacggga cgaacaagta ctccacggac ggtccgagac 361 gcggcgacnn gggnnngncn nnngcgcggg ccgcgaaaca acttcctgcc tcttttaact 421 acggtgcaat cagggccgac accatccacg agcttctcgt gcgcatgaaa cgggcagagc 481 tctactgccc caggccacta ttggcaatag aggtgtcttc acaagacagg cacaagcaaa 541 agatcattgc acctgcaaga cagttgctga actttgacct acttaagttg gctggagacg 601 tg //