LOCUS APHAVP1C 618 bp RNA linear VRL 28-APR-1993 DEFINITION Foot and mouth disease virus (serotype A) variant VP1 capsid protein gene, partial cds. ACCESSION M16081 VERSION M16081.1 KEYWORDS vp1; vp1 capsid protein. SOURCE Foot-and-mouth disease virus ORGANISM Foot-and-mouth disease virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Caphthovirinae; Aphthovirus. REFERENCE 1 (bases 1 to 618) AUTHORS Beck,E. and Strohmaier,K. TITLE Subtyping of European foot-and-mouth disease virus strains by nucleotide sequence determination JOURNAL J. Virol. 61 (5), 1621-1629 (1987) PUBMED 3033288 COMMENT Original source text: Foot and mouth disease virus (serotype A5/Parma(I)/1962), cDNA to viral RNA. FEATURES Location/Qualifiers source 1..618 /organism="Foot-and-mouth disease virus" /mol_type="genomic RNA" /db_xref="taxon:12110" CDS <1..>618 /note="VP1 capsid protein" /codon_start=1 /protein_id="AAA42603.1" /translation="YGGQTQTQRRHHTDVGFIMDRFVKINSLSPTHVIDLMQXXXHGL VGALLRAATYYFSDLEIVVRHDGNLTWVPNGAPEAALSNTSNPTAYNKAPFTRLALPY TAPHRVLATVYNGTNKYSTGGSRRGDTGSTTARAAKQLPASFNYGAIRADTIHELLVR MKRAELYCPRPLLAIEVSSQDRHKQKIIAPAKQLLNFDLLKLAGDV" BASE COUNT 148 a 177 c 162 g 122 t ORIGIN 1 tacggcggtc agacacaaac ccagagacgg caccacacgg acgtcggttt catcatggac 61 agatttgtga agataaacag tctgagtccc acgcatgtta ttgacctcat gcagnnnnnn 121 nnncacgggc tggtgggtgc gctgttgcgt gcagccacgt actacttctc tgacttggag 181 attgttgtgc ggcatgacgg caatttgact tgggtgccca atggtgcccc tgaagcagct 241 ttgtcaaaca ccagcaaccc cactgcctac aacaaggcac cgttcacgag gctcgctctc 301 ccttacactg cgccacaccg cgtgttggca accgtgtaca acgggacgaa caagtactcc 361 acgggtggct cgagacgagg cgacacgggg tcgaccacgg cgcgggccgc gaaacaactt 421 cctgcctctt ttaactacgg tgcaatcagg gccgacacca tccacgagct tctcgtgcgt 481 atgaaacggg cagagcttta ctgccccagg ccactattgg caatagaggt gtcttcacaa 541 gacaggcaca agcaaaagat cattgcaccc gcaaaacagc tgctgaactt tgacctactt 601 aagttggctg gagacgtg //